Transcript Information: R_Transcript_103201.p1


Annotated TAIR IDAT1G42970.1
Annotated Gene Nameglyceraldehyde-3-phosphate dehydrogenase B subunit
Annotated Gene Symbol(s)GAPB
Annotation TypeOrtholog
Chromosome Positionchr1:16127552-16129584 | Forward length=447
E-Value4.5E-274
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.704423363632
Replicate 20.98113553347187
Replicate 34.9238781748739
Condition 2: 8 Hour
Replicate 12.9749181711606
Replicate 21.4106163778318
Replicate 31.8660534282641
Condition 3: 24 Hour
Replicate 11.8237510414531
Replicate 21.1336815317586
Replicate 31.8410218895521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103201.p1 GENE.R_Transcript_103201~~R_Transcript_103201.p1 ORF type:5prime_partial len:428 (+),score=97.82,Gp_dh_C|PF02800.16|5.9e+03,Gp_dh_C|PF02800.16|3e+03,Gp_dh_C|PF02800.16|6.7e-66,Gp_dh_N|PF00044.20|2.2e-52,Gp_dh_N|PF00044.20|1.5e+03 R_Transcript_103201:2-1285(+)
CATGCTTTCCCTGCTCAATGCTCTGTCAAGAAATTCGAAGTTGGTGACTTCTCCGGCCTTCGATCCAGCAACTGTGTGACATTTTCCCGGGAGGCATCTTTTCATGATGTAGTGGCTGCTCAACTAACCACCAAGGCTACAGGAGCAGCTCCTGTCAAGGGTGAAACAGTGGCCAAGCTTAAGGTGGCAATCAATGGATTTGGACGCATCGGCAGGAACTTCCTTAGGTGCTGGCATGGCCGTGAGAACTCACCTCTTGAGGTTGTTGTTGTCAATGACAGTGGAGGCGTCAAGAATGCATCGCACCTGCTTAAATATGACTCCACTCTGGGTACCTTCAAGGCTGATGTGAAAATCGTAGACAACGAGACCATCAGTGTTGATGGCAAGCTTATTAAGGTTGTTTCTAACAGGGACCCCCTTCAACTCCCTTGGGCTGACCTTGGGATCGATATTGTCATCGAGGGAACTGGAGTGTTTGTAGATGGTCCTGGTGCTGGAAAACACATCCAAGCTGGTGCTAAGAAAGTTATCATCACTGCTCCAGCAAAGGGTGCTGATATCCCTACCTATGTTGTTGGGGTGAATGCACAAGATTACTCACACGATGTTTCTAACATCATAAGCAATGCTTCTTGCACGACCAACTGTTTGGCTCCTTTCGTAAAGGTCATAGACGAAGAATTCGGGATTGTGAAGGGGACAATGACCACCACTCATTCCTACACTGGTGACCAGAGGCTCTTGGATGCTTCCCACAGGGACTTGAGGAGAGCCAGGGCTGCAGCACTTAACATCGTCCCAACCAGCACTGGTGCAGCTAAGGCTGTGTCATTGGTCCTACCACAGCTCAAGGGCAAGCTCAATGGAATTGCCCTCCGAGTCCCAACCCCTAACGTCTCAGTTGTTGACCTTGTTGTCAATGTCGCAAAGAAAGGAATCTCAGCTGAGGATGTCAACAACGCCTTCAGGAAAGCAGCTGAAGGTCCACTGAAAGGCATATTGGAGGTTTGCGACATCCCTCTTGTGTCGGTAGATTTCAAGTGCTCTGATGTGTCATCTACCATAGACTCTTCTCTCACCATGGTCATGGGTGATGATATGGTTAAGGTCGTGGCCTGGTACGACAATGAGTGGGGATACAGTCAGCGTGTGGTTGATTTGGCGCATTTGGTGGCAAGCAAGTGGCCTGGAATGGAGGGAGTAGCCGGAAGTGGAGACGCATTGGAGGATTTCTGCAAGACCAACCCCGCTGAGGTCGAGTGCAAGGTTTACGAAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103201.p1 GENE.R_Transcript_103201~~R_Transcript_103201.p1 ORF type:5prime_partial len:428 (+),score=97.82,Gp_dh_C|PF02800.16|5.9e+03,Gp_dh_C|PF02800.16|3e+03,Gp_dh_C|PF02800.16|6.7e-66,Gp_dh_N|PF00044.20|2.2e-52,Gp_dh_N|PF00044.20|1.5e+03 R_Transcript_103201:2-1285(+)
HAFPAQCSVKKFEVGDFSGLRSSNCVTFSREASFHDVVAAQLTTKATGAAPVKGETVAKLKVAINGFGRIGRNFLRCWHGRENSPLEVVVVNDSGGVKNASHLLKYDSTLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWADLGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNAQDYSHDVSNIISNASCTTNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNNAFRKAAEGPLKGILEVCDIPLVSVDFKCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGMEGVAGSGDALEDFCKTNPAEVECKVYEA*

Click here to download the sequence:
Link to NCBI Protein BLAST