Transcript Information: R_Transcript_103202.p1


Annotated TAIR IDAT1G42970.1
Annotated Gene Nameglyceraldehyde-3-phosphate dehydrogenase B subunit
Annotated Gene Symbol(s)GAPB
Annotation TypeOrtholog
Chromosome Positionchr1:16127552-16129584 | Forward length=447
E-Value2.5E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2128636030743
Replicate 22.6527583859301
Replicate 30.43104076121792
Condition 2: 8 Hour
Replicate 10.98733326400182
Replicate 21.6229672304086
Replicate 31.6102235227763
Condition 3: 24 Hour
Replicate 11.9131506023087
Replicate 22.7272631961466
Replicate 31.1179204006749


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103202.p1 GENE.R_Transcript_103202~~R_Transcript_103202.p1 ORF type:5prime_partial len:372 (+),score=89.14,Gp_dh_C|PF02800.16|3.9e+03,Gp_dh_C|PF02800.16|4.9e-66,Gp_dh_N|PF00044.20|3.3e-07,Gp_dh_N|PF00044.20|2.6e-16,Gp_dh_N|PF00044.20|1.2e+03 R_Transcript_103202:2-1117(+)
CATGCTTTCCCTGCTCAATGCTCTGTCAAGAAATTCGAAGTTGGTGACTTCTCCGGCCTTCGATCCAGCAACTGTGTGACATTTTCCCGGGAGGCATCTTTTCATGATGTAGTGGCTGCTCAACTAACCACCAAGGCTACAGGAGCAGCTCCTGTCAAGGGTGAAACAGTGGCCAAGCTTAAGGTGGCAATCAATGGATTTGGACGCATCGGCAGGAACTTCCTTAGGTGCTGGCATGGCCGTGAGAACTCACCTCTTGAGGTTGTTGTTGTCAATGACAGTGGAGGCGTCAAGAATGGAACTGGAGTGTTTGTAGATGGTCCTGGTGCTGGAAAACACATCCAAGCTGGTGCTAAGAAAGTTATCATCACTGCTCCAGCAAAGGGTGCTGATATCCCTACCTATGTTGTTGGGGTGAATGCACAAGATTACTCACACGATGTTTCTAACATCATAAGCAATGCTTCTTGCACGACCAACTGTTTGGCTCCTTTCGTAAAGGTCATAGACGAAGAATTCGGGATTGTGAAGGGGACAATGACCACCACTCATTCCTACACTGGTGACCAGAGGCTCTTGGATGCTTCCCACAGGGACTTGAGGAGAGCCAGGGCTGCAGCACTTAACATCGTCCCAACCAGCACTGGTGCAGCTAAGGCTGTGTCATTGGTCCTACCACAGCTCAAGGGCAAGCTCAATGGAATTGCCCTCCGAGTCCCAACCCCTAACGTCTCAGTTGTTGACCTTGTTGTCAATGTCGCAAAGAAAGGAATCTCAGCTGAGGATGTCAACAACGCCTTCAGGAAAGCAGCTGAAGGTCCACTGAAAGGCATATTGGAGGTTTGCGACATCCCTCTTGTGTCGGTAGATTTCAAGTGCTCTGATGTGTCATCTACCATAGACTCTTCTCTCACCATGGTCATGGGTGATGATATGGTTAAGGTCGTGGCCTGGTACGACAATGAGTGGGGATACAGTCAGCGTGTGGTTGATTTGGCGCATTTGGTGGCAAGCAAGTGGCCTGGAATGGAGGGAGTAGCCGGAAGTGGAGACGCATTGGAGGATTTCTGCAAGACCAACCCCGCTGAGGTCGAGTGCAAGGTTTACGAAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103202.p1 GENE.R_Transcript_103202~~R_Transcript_103202.p1 ORF type:5prime_partial len:372 (+),score=89.14,Gp_dh_C|PF02800.16|3.9e+03,Gp_dh_C|PF02800.16|4.9e-66,Gp_dh_N|PF00044.20|3.3e-07,Gp_dh_N|PF00044.20|2.6e-16,Gp_dh_N|PF00044.20|1.2e+03 R_Transcript_103202:2-1117(+)
HAFPAQCSVKKFEVGDFSGLRSSNCVTFSREASFHDVVAAQLTTKATGAAPVKGETVAKLKVAINGFGRIGRNFLRCWHGRENSPLEVVVVNDSGGVKNGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNAQDYSHDVSNIISNASCTTNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNNAFRKAAEGPLKGILEVCDIPLVSVDFKCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGMEGVAGSGDALEDFCKTNPAEVECKVYEA*

Click here to download the sequence:
Link to NCBI Protein BLAST