Transcript Information: R_Transcript_103364.p1


Annotated TAIR IDAT1G03100.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:744026-746407 | Reverse length=793
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3807106291325
Replicate 21.5713360311552
Replicate 32.8079226730767
Condition 2: 8 Hour
Replicate 12.6539518136369
Replicate 23.4623300915384
Replicate 34.4969151472443
Condition 3: 24 Hour
Replicate 14.2953316748608
Replicate 23.0735070453966
Replicate 33.9539079434395


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103364.p1 GENE.R_Transcript_103364~~R_Transcript_103364.p1 ORF type:complete len:775 (+),score=159.39,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|25,PPR_2|PF13041.2|4,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|5.4e-05,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|6.2e+02,PPR|PF01535.16|0.39,PPR|PF01535.16|0.63,PPR|PF01535.16|0.00022,PPR|PF01535.16|2.8,PPR|PF01535.16|0.0022,PPR|PF01535.16|45,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.073,PPR_3|PF13812.2|0.96,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|4.3,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|52,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|0.086,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|2.4e+03 R_Transcript_103364:341-2665(+)
ATGCTGAGAGCAAGGAAGATAAGATGCCAATTTTTGTCTACATTGCTTGGTCACTGCCCCTACTTCATTTCTAGTGTCTTATCACATTCAAAAGGACAAACACTCTGTCAGCCAGCTATTTTCTGCTTAATCAATGGTAGTAGATCTATTGCCTCTTTCAGCTATCAGGATCATATAATCAATCAAACACATACCTTTTCAACTGTCGCTGAGACAATCTTGGTTCAGGCTCGTGACCCAGCCAAGCTTAGTTTGGATATACGTAATGCAGTTGATGAGCACAGATACCATGATGCATGGAGATATTTTGAGCAGCACCTGCACATGGAAGGATTTCCTCGGAAGTCTGTTGTAAATAAGTTGCTTACAAGCTTTGCAGAAACCTTGGACTCCAACTTGCTCGAGCAGGCTTTTAAACTGGTGGAACAGGCATTTGAGGAAGGTAAACAGACTTTGTTTGAGAAAGGGACACTTATATATCTTTCTCTAGCACTTGCAAAATGTGGTTTTTCAGTGCCTGCATCGATTCTCTTGAGGAAGTTAGTGGGAATGGAAGAATATCCCCCTGTGACAGCTTGGGCTGCAGTCTTAGCCCACATGTCACAGTCATCTTCTGGAGCTTATCTTGCTGCTGAATTGATTCTTGAGATAGGTTACCTGTTCCAGGATAACAGGGTAGACCCCCGTAAGAAAAGCAATGCTCCCTTGATTGCAATGAAGCCTAACACACTTGCTATAAATGTTGCTTTGGCTGGGTGCCTTCTATTTGGGACTACTAGGATAGCCGAGCAGCTTCTTGACATGAGGCCTAGAATTGGGGTTAAACCTGATGCAACTCTATTAATAATGATGGCACAGATTTATGAAAGGAATGGGCGAAGAGAGGAACTAAAAAACCTGAAGAGATACATAGATGAAGCCCATGACCTTGGGGACATTCAACTTCGGCAATACTGTAATTGCTTGCTCAACTGCCATTTGAAATTTGGGGACCTAGATTCGGCATCTCAGATGGTTTTAGAAATGCTTTGTAAGGCAAAGGAAGCAAAGAATTCTCTTGCTGCAGCCACGTTCATGTTTGAGCCTATTAAAAGACAAAGTTCATCTCCTTCAACGGATATTTCCAGCAGTTTGCAGTCAAATATTTCAGATACGGGTGTGAATCAAGCCAGGCAGTTTATATCTTTTGCAGATTTCTGCAGGGACCGACATTTCATTTATTTGGAGGCAGAGGCAAAAAAGATGCTTGATTCTCTGTCACTGAAATTGCAGAAGGAAACAGATTTGGTGACTACTACACGTGGTATTCTTCAACCAACGGAGAAAACATATGTAAAGTTAACCAAAGCATTTCTGGAATCTGGGAAGATAAAGGAATTGACTGAATTTCTAATCAAGGCAGAGAAGGAAGATTCCCCGGTTTCTGCTGATGATTCAGCCTTGGTTCATGTCACTAATTCATGCATTTCCCTTGGCTGGTTAGATCAAGCTCATGATCTTCTTGATGAGATGCGTTTTCATGGAATTATGACCAGTTCTTCTGTGTACTCCTCCCTTTTAAAAGCATACTGTAAGGCAAATAGGACTCCAGAGGTTATGTCACTTATGCGTGAAGTTCGGAAGATTGGGATTCAGCTGGACGCAAGTTGTTATGAGGCATTAATACAGTCCAGGGTGATACAGAAAGATAATCAAGGTGCCCTAGAACTCTTTAAAGAGATGAAAGAAGCTAAAATACCTAGAGCTGGTCACCAAGAATTCGAGGTTCTGGTGGAGAGTTGTGCGGGGAGTGGTGAAGCAGGATTTATGGCAAAACTTTTGCATGAAATTAAGGAGGGGCAGAGAGTGGATTGTGGAGTCCACGATTGGAACAATGTGATTCATTTCTTCTGTAAGAAAAGATTGATGCCAGATGCTGAGAAGGCTCTGAAGAAAATGAGGAGCTTGGGACATACCCCAAATGCTCAAACTTTCCACTCTATGGTTACTGGTTATGCAGCTATTGGAGGGAAGTATATTGAGGTGGCTGAGCTGTGGGGTGAGATGAAAAGTCTTGCTGCAGCCACACCGATGAAGTTTGATCAAGAACTCTTGGATTCTGTTCTCTACACTTTCGTAAGGGGTGGATTTTTTGCTCGAGCAAATGAGGTTGTGGAGATGATGGAAAAAGGCAAGATGTTCATTGACAAATACAAGTATCGAGCTCTCTTCTTAAAGTACCATAAGACCTTATACAAGGGTAAGACTCCAAAATCCCAAACAGAATCTCAGTTAAGGAAACGAGAAGCAGCATTGACTTTCAAAAAATGGATTGGCTTATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103364.p1 GENE.R_Transcript_103364~~R_Transcript_103364.p1 ORF type:complete len:775 (+),score=159.39,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|25,PPR_2|PF13041.2|4,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|5.4e-05,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|6.2e+02,PPR|PF01535.16|0.39,PPR|PF01535.16|0.63,PPR|PF01535.16|0.00022,PPR|PF01535.16|2.8,PPR|PF01535.16|0.0022,PPR|PF01535.16|45,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.073,PPR_3|PF13812.2|0.96,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|4.3,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|52,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|0.086,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|2.4e+03 R_Transcript_103364:341-2665(+)
MLRARKIRCQFLSTLLGHCPYFISSVLSHSKGQTLCQPAIFCLINGSRSIASFSYQDHIINQTHTFSTVAETILVQARDPAKLSLDIRNAVDEHRYHDAWRYFEQHLHMEGFPRKSVVNKLLTSFAETLDSNLLEQAFKLVEQAFEEGKQTLFEKGTLIYLSLALAKCGFSVPASILLRKLVGMEEYPPVTAWAAVLAHMSQSSSGAYLAAELILEIGYLFQDNRVDPRKKSNAPLIAMKPNTLAINVALAGCLLFGTTRIAEQLLDMRPRIGVKPDATLLIMMAQIYERNGRREELKNLKRYIDEAHDLGDIQLRQYCNCLLNCHLKFGDLDSASQMVLEMLCKAKEAKNSLAAATFMFEPIKRQSSSPSTDISSSLQSNISDTGVNQARQFISFADFCRDRHFIYLEAEAKKMLDSLSLKLQKETDLVTTTRGILQPTEKTYVKLTKAFLESGKIKELTEFLIKAEKEDSPVSADDSALVHVTNSCISLGWLDQAHDLLDEMRFHGIMTSSSVYSSLLKAYCKANRTPEVMSLMREVRKIGIQLDASCYEALIQSRVIQKDNQGALELFKEMKEAKIPRAGHQEFEVLVESCAGSGEAGFMAKLLHEIKEGQRVDCGVHDWNNVIHFFCKKRLMPDAEKALKKMRSLGHTPNAQTFHSMVTGYAAIGGKYIEVAELWGEMKSLAAATPMKFDQELLDSVLYTFVRGGFFARANEVVEMMEKGKMFIDKYKYRALFLKYHKTLYKGKTPKSQTESQLRKREAALTFKKWIGLF*

Click here to download the sequence:
Link to NCBI Protein BLAST