Transcript Information: R_Transcript_10340.p1


Annotated TAIR IDAT4G22260.1
Annotated Gene NameAlternative oxidase family protein
Annotated Gene Symbol(s)IM, IM1
Annotation TypeOrtholog
Chromosome Positionchr4:11769967-11772350 | Reverse length=351
E-Value4.8E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.865266082964
Replicate 20.15325766727225
Replicate 30.58520862471922
Condition 2: 8 Hour
Replicate 11.0723736473246
Replicate 21.7137902141055
Replicate 31.0599480654241
Condition 3: 24 Hour
Replicate 10.58651332333551
Replicate 20.48296187351629
Replicate 32.0769354812384


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10340.p1 GENE.R_Transcript_10340~~R_Transcript_10340.p1 ORF type:complete len:274 (+),score=17.25,AOX|PF01786.13|2.1e-26 R_Transcript_10340:1146-1967(+)
ATGGCGATTTCTCTCTCTCTTTCGCTTCAAACGGCGTCACTTATCTCAACAAAAGCAACAATCAAATCATCACAATCACACCAAATTCGTCAAAATTCAGTACGGATCAATTCTCTCTCTTCCTTCAATCTCCGTTCTTCATCTCACCGATTTTCTCACAGCAAGTTTATGCGAGTTCGAGTGCGAGCAACAATTTTGAAGGAAGATGATGAGAAAGTGAGAGTAGAAAAGTCATTTCAACCGAAAACGTTAACCGATGATGGATTGCAAGGAGATGATCGAGTAACTCCACCAAGCGGGTTTGAGAGACGAATTATCAAGTTGGAGCAATCCGTAAATATATTTTTAACGGATTCGGTGATAAAGATACTTGATACTTTGTATCATGACCGACATTATGCGAGGTTCTTTGTCTTGGAAACCATTGCAAGGGTTCCTTATTTTGCATTTATATCTGTGCTGCATTTGTATGAGAGCTTCGGTTGGTGGAGAAGAGCTGACTATTTGAAAGTTCATTTTGCTGAGAGCTGGAATGAGATGCACCATCTTCTAATTATGGAGGAATTGGGAGGAAATGCTTGGTGGTTTGACCGTTTTCTTGCTCAGCATATTGCTGTCTTTTATTATATTATGACGGTTATTATGTACGCTATCAGTCCAAGAATGGCTTATCACTTTTCTGAATGTGTAGAGAATCACGCATACGAAACTTATGACAAATTTATAAAGGCTCAGGGAGGTGAGTTTACGTGTTCTCTAGACTTAAAAACTGTAGGCTGTAACATTTCCTGCGGATTAGTAGCTTATTTATGCTTTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10340.p1 GENE.R_Transcript_10340~~R_Transcript_10340.p1 ORF type:complete len:274 (+),score=17.25,AOX|PF01786.13|2.1e-26 R_Transcript_10340:1146-1967(+)
MAISLSLSLQTASLISTKATIKSSQSHQIRQNSVRINSLSSFNLRSSSHRFSHSKFMRVRVRATILKEDDEKVRVEKSFQPKTLTDDGLQGDDRVTPPSGFERRIIKLEQSVNIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFISVLHLYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVFYYIMTVIMYAISPRMAYHFSECVENHAYETYDKFIKAQGGEFTCSLDLKTVGCNISCGLVAYLCFE*

Click here to download the sequence:
Link to NCBI Protein BLAST