Transcript Information: R_Transcript_10346.p1


Annotated TAIR IDAT5G53350.1
Annotated Gene NameCLP protease regulatory subunit X
Annotated Gene Symbol(s)CLPX
Annotation TypeOrtholog
Chromosome Positionchr5:21644060-21647503 | Forward length=579
E-Value2E-274
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.463851977245
Replicate 234.364187186536
Replicate 340.146237344122
Condition 2: 8 Hour
Replicate 143.549254612055
Replicate 257.604417061462
Replicate 356.307677927948
Condition 3: 24 Hour
Replicate 142.102553047347
Replicate 237.623676930985
Replicate 336.99703716107


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10346.p1 GENE.R_Transcript_10346~~R_Transcript_10346.p1 ORF type:complete len:578 (+),score=138.56,AAA_2|PF07724.10|2.8e-43,ClpB_D2-small|PF10431.5|4.6e-14,AAA|PF00004.25|4.7e-14,AAA_5|PF07728.10|2.9e-05 R_Transcript_10346:471-2204(+)
ATGGCTGCAGCTGTTCTAAGATCAAAATCAGCCAGAGAAACAGCAATCCTAACAGCCTCGCAATTTAGATACTACTTTGTTAATAATAATAATAATATGCATATGGGTCATAGAACTAGTAGTAGTAATTATCATAGTGCCCCAAAACCTAAACAAGATTATTACTTTTCTTCCTTATACAAGCCCAGTAGAGGAGAAAAAATTGTTCAAAAAGGGCCCACCTTTCTGGGTGGTTCTTCTGATCATCAATTTAGGAAATTGGGTTCTGATTCTAATGTTTTGAGGTGTGTTGGGGACCCACCTGAGATGTGGCAGCCTCCTGCTGATGGGGTTATGGTCCGGGCCGGGCTTAATTCCGGCCGAGGCGGTGGTGGCGGCGGCGGCAATGGTGGTGGGGCTGGTGGGCCGAGCTCGGGTTCAGGTGGTGGTGGTGGGTTTGGATCCAACTCTAAGGATGGATGCTGGGGTGGGTCAAATTTGGGAAGTGGTTTCCCTACCCCTAAGGAAATTTGCAAAGGGCTTGATAAGTTTGTGATTGGGCAAGAGAAAGCGAAGAAGGTTCTCTCTGTGGCCGTGTATAATCACTACAAAAGAATCTATTATGAGAATATGCAAAGGCAATCAGGGGAGTCAGGTGATGAGAAACCAGACCCAACTGATGAACACGTGGAGCTCGAAAAAAGCAACATTCTCTTAATGGGACCCACAGGCTCAGGGAAGACTTTACTTGCAAAAACAATGGCAAAGCTTGTAAATGTGCCCTTCGTCATTGCTGATGCAACCACATTGACTCAGGCAGGATATGTTGGTGAAGATGTAGAGTCGATTTTATACAAGCTCCTCATGGTTGCTGATTATAACGTGGCAGCCGCCCAACAAGGCATCGTGTACATTGATGAAGTTGACAAGATCACTAAAAAGGCTGAGAGTCTTAATATCAGTAGGGATGTATCTGGAGAAGGTGTCCAGCAGGCTTTACTGAAAATGTTGGAAGGAACGATTGTCAATGTTCCTGAGAAAGGAGCTCGAAAGCATCCAAGGGGTGACAATATCCAGATTGACACAAAGGATATTCTTTTCATCTGTGGCGGTGCTTTTATTGACTTGGAGAAAACCATCTCAGAAAGGCGCCATGATTCTTCTATTGGTTTTGGTGCTCCTGTACGTGCAAACATGAGGACTGGTGGTCCCACAAGCGCTGCTATTACTTCATCCTTGTTGGACAATGTAGAAAGTTCTGACCTAATTGCTTACGGGCTGATACCTGAATTTGTTGGAAGATTTCCTATCCTTGTTAATTTGTCAGCCCTTACGGAAGATCAACTTGTTGAGGTTCTGACAGAGCCAAAGAATGCACTAGGGAAGCAATACAGAAAGATGTTCCAAATGAACGAGGTGAAATTGCATTTTACAGAGAAAGCTTTAAGATTAATTGCTAAAAAGGCAATAAGCAAGAACACAGGGGCTCGGGGATTAAGAGCGATACTGGAGAACATCTTGATGGAGGCCATGTACGAGATTCCTGATACAAGAGCGGGTGATGATATCATTGACGCTGTAGTTGTTGACGAAGAAGCAGTAGGGTTAGAGGGTAAAGGGCGTGGAGCTAGAGTTCTTTACGGCAAGGGAGCCTTGGACCGCTATCTTTCAGAGCAGAAACCGAATGAGGTTGAAGGTTCTGAAGCAGAAACCGAGGCAGAAAATGACCTCCAATCTGTGGTTGCTAGCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10346.p1 GENE.R_Transcript_10346~~R_Transcript_10346.p1 ORF type:complete len:578 (+),score=138.56,AAA_2|PF07724.10|2.8e-43,ClpB_D2-small|PF10431.5|4.6e-14,AAA|PF00004.25|4.7e-14,AAA_5|PF07728.10|2.9e-05 R_Transcript_10346:471-2204(+)
MAAAVLRSKSARETAILTASQFRYYFVNNNNNMHMGHRTSSSNYHSAPKPKQDYYFSSLYKPSRGEKIVQKGPTFLGGSSDHQFRKLGSDSNVLRCVGDPPEMWQPPADGVMVRAGLNSGRGGGGGGGNGGGAGGPSSGSGGGGGFGSNSKDGCWGGSNLGSGFPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYYENMQRQSGESGDEKPDPTDEHVELEKSNILLMGPTGSGKTLLAKTMAKLVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRHDSSIGFGAPVRANMRTGGPTSAAITSSLLDNVESSDLIAYGLIPEFVGRFPILVNLSALTEDQLVEVLTEPKNALGKQYRKMFQMNEVKLHFTEKALRLIAKKAISKNTGARGLRAILENILMEAMYEIPDTRAGDDIIDAVVVDEEAVGLEGKGRGARVLYGKGALDRYLSEQKPNEVEGSEAETEAENDLQSVVASM*

Click here to download the sequence:
Link to NCBI Protein BLAST