Transcript Information: R_Transcript_103465.p1


Annotated TAIR IDAT5G47490.1
Annotated Gene NameRGPR-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19264675-19270487 | Forward length=1361
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7870119617494
Replicate 24.8060201239023
Replicate 36.9801646752224
Condition 2: 8 Hour
Replicate 14.9917535836659
Replicate 26.0140855309627
Replicate 38.8810455395885
Condition 3: 24 Hour
Replicate 18.7036035984858
Replicate 27.7619366052675
Replicate 38.1883187061855


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103465.p1 GENE.R_Transcript_103465~~R_Transcript_103465.p1 ORF type:complete len:1398 (+),score=330.00,Sec16_C|PF12931.3|4.5e-57,Sec16|PF12932.3|4.3e-17 R_Transcript_103465:308-4501(+)
ATGGCGTCACCTCCATTTCCTGTGGAGGATCTGACGGATGAGAATTTTTTTGATAAGTTGGTGGATGATGAGATTGAAGGTGCTGGATCTGATCACGGATTTATAAAAAATGTTGGCAGTAATGTTGTGGAAGAGTTTGAGAAATTGAGTGTTAATGCATTTGCTAGCCCCTTAGATAGCGTGCAGAGTGCCGAAGGGGGCATCGGTGAAAATGATGTCATCAGTTCATATGAAAAAGAGGGCAAGGTGGAGGGTAGTAGTGGTGTTGCTGAATCATCAGAATGGGTTGACGGAAGGAGTGTTTCCGAGTGTAGTGATCATCAGGTGAGTCCGGAGAGTGCATCTAATTCAGTAAATGGTAACAACAGTGCAAATGGAGGTGGTATGGTTAAGGAAGTGCAATGGAGTGCATTTGGTGGCGGCAAAGGAGAGGAATCATACTCGGATTTTTTCAATGAATTTGGGGATAACTCAGCTGATCCTTTTGGAGAAGTGGCCAATGGGTTTGTTTCGTCATCAGAGCCTGCAGTTGGTGTTTCATCTAATCAAGAGAACTGCTCAAGTTCATACAGCTTTGTTCAAAATGAAGAGAATTTGCGGCATGGTTCATCTAGTGATTACGCGCAGCATGGTTCATCCACTAATTATACTGCAGATACACAGGAGCAAAGTAATAGTCAATATTGGGAAAACTTGTATCCAGGCTGGAGATATGATCCGAATTCTGGTCAGTGGCATCAGGTGGATGGTCTTGATTCAAAAGTTGATAATGAGGAAAACTATAATGATAGCGCTCAGTCAATATGTGAATCAGCTCCTGTGGATCCAAAATCTGATGTGTATTATTTGCAGCAAACAGCTCAATCCGTTGCTGGAAGTGCAATTGCAGAAAGTACAACAGGTACCCTATCTTACTGGAATCAGAACACACAAGGGAGCACAGAATATTCTGCACACATGGTGTTTGATCCACATTATCCTGGTTGGTACTATGATACAATTGCACAAGAATGGAGAGCACTAGACTCCTGCACTTCATCGCTCAATCAGTCGGCAAACTTGGATCACAGCCAACAGATGTCAAACGGGAGTTTTGCTGCTGGTAATTATTATGCAGAGCAGAATATGGCCTATGGACAAGGTAAACAGGTTAGTAGTTATAATCACCAACAAGACCAAAACCTGAATTGGAGAGATCCTGGGAATAGCCATCAGCAAGATATGAGTTTACTGCAACCTGAGCCGTTAGGTATGAATGTGGCTGTTGGTTCAAATCAACACACACTATATGGGAATGGATATTTGTCAAGTGGTCAAATCAATTACTCATCAGACCATAGGACAGGTGTTACACCATCTGAGAAAAATGACCAAACAAGTCGTGGTTTCGATAGCAGTAACATAATGAATGGATTTCAGGGCTTCAGTAATGGTGGCACTGGCTTTCAAAACTTTGCTTCTGCAGAACACTTTTCCCAGCACAACAATCAACGCAACATGGAATTTAACCATCAGTTCTCTGATGCTTACTTTCCCAAGGGTGTAAATTTTTCACAGCAACCACTTCATGGCAACAGACAAGCTAGTGAGGGGAGATCTTCTGCTGGACGTCCTCCACATGCTCTTGTTGCATTTGGATTTGGGGGAAAACTCATAGTCATGAAGGATGACAGTACTTTACATGCACAATCAGCTTATGCAAGCCAGAGCTCAGCAGGAGGTGTAATAAATGTCCTCAACATGACGGAAATTGCTATGCTGAGGAATGATGGTGCAGATGTTGCACTTGGCACTTGTGATTATTTTCGTACTCTATGCCACCAATCATTACATGGCCCATTGGTTTCAAACAATGTGGGAAACAAAGAGTTACATAAATGGATTGATGACAAGATTGGAAGCTGCAGTTCAGAAGTGGACTACAGGAAAGGCGAAGCTTTGAAGATGCTTTTCTCCTTGTTGAAAATAGCATGCCAATATTATGGGAAGCTTCGATCTTTTGGCACAGATCTTGGCCTGAAGGAAAATGACTGCCCAGAGTCAGCTTTGGCAAAGCTTTTTGCATCTGCAAAAAGATATGGTTCAGAGTTTAGTGCTGTCACTCATTGCTTGCAGAATATGCCTTCTGAACAACAAATACAGGCAACAGCTGATAAGGTTCAGATGCTTCTTGTATCTGGTAGAAAGTTGGAGGCTCTGCAGTGTGCACAAGAAGGTCATTTATGGGGACCAGCAATTGTTATTGCAGCTCTGCTTGGTGAACAGTTCTATGGTGAAACCGTGAAGCAAATGGCTCTACACCAATTAGCAGCTGGATCCCCTCTGAGAACTTTGTGTCTCCTACTTGCGGGGCAACCTGCCGAAGTATTCTCCAATTTGACAACTAGTAATCCACCAAGTGGTACAAATGTTTCTCTACCAGTGCAGGTTGGGCCCAGCTGTATGCTAGATGAATGGGAAGAGAATCTCGCAATAATAACTGCAAATAGGACAAAAGGCGACGAGCTTGTTATTACTCATCTTGGGGACTGTCTATGGAAAGAGAGGGGTGAGGTTACTGCAGCACATACCTGCTACTTGGTGGCTGAAGCTAACATTGAGTCATATTCAGAGAGTGAAAGACTTTGTCTCCTTGGTGCCGATCATTTAAAATATCCAAGAACATATGCCAGTCCTGAGGCCATCCAGAGGACAGAATTATATGAATATGCTAAGGTGCTCGGGAATTCCCAATTTATATTGCTACCTTTTCAGCCCTACAAGATTATCTATGCTTGCATGCTGGCTGAAGTTGGAAAATTGTCAGATTCTTTGAAATATTGCCAAGCAGTTTTGAAGTCTTTGAAAACTGGTAGATCACCTGAGGTAGATGCGTGGCAACAGATGGTATCTTCTCTTGAGGAGCGGATAAAAATCCATCAGCAGGGTGGCTATGCAACTAACTTGGCTCCAACAAAACTGGTGGGTAAGTTGCTGAACTTTTTTGACAACACCGCACATCGGGTTGTTGGAGGATTACCTCCACCTATACCTTCAACAGCACACAGTAATGGTCATCACAGTGAACATGATCATCAGTCAAGGGGTCAACGGGTTTCAACTAGCCAGTCCACTATGGCTATGTCTTCTTTGATGCCCTCATCCTCTATGGAAGGTAGCCCTCACAAGTCGTTTCATAATCGGAGCATTTCAGAACCAGACATTGGTAGAACACCCAGGAAGGTTGAATCACCGGAAAAATCAAACTCATCTGGGCCACATGACAGTACATCAACCTCAGGTGGTTCATCTCGCATTGGTCGGTTTGGCTCACAGATTTTCCAAAAAACTGTTGGTTTGGTATTAAGATCCCGTACAGATCGTCAAGCTAAGTTGGGAGAAAAGAACAAGTTTTATTATGACGAAAAGCTAAAGCGTTGGGTTGAGGAAGGTGCTGAACCTCCAGCTGAAGAACCGGCCTTAGCTCCGCTGCCACCAACTGCCACTTTCATGAATGGAATTCCAGATCATGCCAAGAAAGGTGATTCTGTTAATGGTACCATACATGCAAATGGGGAATCTGACTTTAAAAGCCCAAGCTCTGTTGAAAAGAGTGCTGGGACCCCACCAATTCCATCTGGTTCAAACCAGTTTTCTGCCCGTGGGCGGATGGGTGTTCGTGCAAGGTATGTTGATACATTCAACAAAGGAGGTGGAGCTCAAGCAAACTTATTCCAGTCACCGTCACCATCAATTCCAGCTGTTAAACCTGCTATGAATAATGCCAAGTTTTTCGTTCCAACTCCAAGTGCGGGAGGGCAAGAAACTGACAGTATTCAAGGCCCACAAGAAGCTGCGGTTCCAGATGAGGATAATACCTCCTCATCAAATGGGAACCAGTTATTTTCACCTCCACTAATGCTTACACCACACTCAACTATACAGAGACATCCAAGCATGGATCACATATCGTACAAGGGAAAAGAAGGTATGACCAATGGCGGTGGTCACCCACCTCCCCACTCAAGGAGAACATTATCATGGAGTGGAGGCCTTGGGGATCCTTCAAATCATTTTAACATGGGTGAAACAAGACCTCTAGGGGAGGCGCTTGGTTTTCCTCCATCAACCTATATGCCCGGTAATGCTCAACCCATGACCTATTCTTCGAATTGTACCACTGTGGCAGAAGACCTTCAAGAAGTTGAGCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103465.p1 GENE.R_Transcript_103465~~R_Transcript_103465.p1 ORF type:complete len:1398 (+),score=330.00,Sec16_C|PF12931.3|4.5e-57,Sec16|PF12932.3|4.3e-17 R_Transcript_103465:308-4501(+)
MASPPFPVEDLTDENFFDKLVDDEIEGAGSDHGFIKNVGSNVVEEFEKLSVNAFASPLDSVQSAEGGIGENDVISSYEKEGKVEGSSGVAESSEWVDGRSVSECSDHQVSPESASNSVNGNNSANGGGMVKEVQWSAFGGGKGEESYSDFFNEFGDNSADPFGEVANGFVSSSEPAVGVSSNQENCSSSYSFVQNEENLRHGSSSDYAQHGSSTNYTADTQEQSNSQYWENLYPGWRYDPNSGQWHQVDGLDSKVDNEENYNDSAQSICESAPVDPKSDVYYLQQTAQSVAGSAIAESTTGTLSYWNQNTQGSTEYSAHMVFDPHYPGWYYDTIAQEWRALDSCTSSLNQSANLDHSQQMSNGSFAAGNYYAEQNMAYGQGKQVSSYNHQQDQNLNWRDPGNSHQQDMSLLQPEPLGMNVAVGSNQHTLYGNGYLSSGQINYSSDHRTGVTPSEKNDQTSRGFDSSNIMNGFQGFSNGGTGFQNFASAEHFSQHNNQRNMEFNHQFSDAYFPKGVNFSQQPLHGNRQASEGRSSAGRPPHALVAFGFGGKLIVMKDDSTLHAQSAYASQSSAGGVINVLNMTEIAMLRNDGADVALGTCDYFRTLCHQSLHGPLVSNNVGNKELHKWIDDKIGSCSSEVDYRKGEALKMLFSLLKIACQYYGKLRSFGTDLGLKENDCPESALAKLFASAKRYGSEFSAVTHCLQNMPSEQQIQATADKVQMLLVSGRKLEALQCAQEGHLWGPAIVIAALLGEQFYGETVKQMALHQLAAGSPLRTLCLLLAGQPAEVFSNLTTSNPPSGTNVSLPVQVGPSCMLDEWEENLAIITANRTKGDELVITHLGDCLWKERGEVTAAHTCYLVAEANIESYSESERLCLLGADHLKYPRTYASPEAIQRTELYEYAKVLGNSQFILLPFQPYKIIYACMLAEVGKLSDSLKYCQAVLKSLKTGRSPEVDAWQQMVSSLEERIKIHQQGGYATNLAPTKLVGKLLNFFDNTAHRVVGGLPPPIPSTAHSNGHHSEHDHQSRGQRVSTSQSTMAMSSLMPSSSMEGSPHKSFHNRSISEPDIGRTPRKVESPEKSNSSGPHDSTSTSGGSSRIGRFGSQIFQKTVGLVLRSRTDRQAKLGEKNKFYYDEKLKRWVEEGAEPPAEEPALAPLPPTATFMNGIPDHAKKGDSVNGTIHANGESDFKSPSSVEKSAGTPPIPSGSNQFSARGRMGVRARYVDTFNKGGGAQANLFQSPSPSIPAVKPAMNNAKFFVPTPSAGGQETDSIQGPQEAAVPDEDNTSSSNGNQLFSPPLMLTPHSTIQRHPSMDHISYKGKEGMTNGGGHPPPHSRRTLSWSGGLGDPSNHFNMGETRPLGEALGFPPSTYMPGNAQPMTYSSNCTTVAEDLQEVEL*

Click here to download the sequence:
Link to NCBI Protein BLAST