Transcript Information: R_Transcript_10376.p1


Annotated TAIR IDAT1G06110.1
Annotated Gene NameSKP1/ASK-interacting protein 16
Annotated Gene Symbol(s)SKIP16
Annotation TypeHomolog
Chromosome Positionchr1:1853237-1854938 | Reverse length=436
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7782620300311
Replicate 23.6825971934345
Replicate 34.7372572515603
Condition 2: 8 Hour
Replicate 13.97414561971
Replicate 24.6243708519729
Replicate 34.1815228654295
Condition 3: 24 Hour
Replicate 12.4039588720109
Replicate 22.5981325918219
Replicate 33.1513710936632


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10376.p1 GENE.R_Transcript_10376~~R_Transcript_10376.p1 ORF type:5prime_partial len:382 (+),score=56.54,DUF525|PF04379.10|5.8e-32,UVR|PF02151.15|1.6e+04,UVR|PF02151.15|0.00032,UVR|PF02151.15|1.5e-07 R_Transcript_10376:1-1146(+)
CTGGCAACACCACCACCCCACCTCCCCGCTCTAAAAGTTCCTCAAAAACGTACAGTCGCTATTTCAGATTTCTCAACTTCATCAAATCATCAGCAACTTCATTCCCCCATTTCTCTTTTCCAACTTCTAACATCACCCAGAAAAAAAAAAAAAACCCTACAAAAACAAAAAAAAGAAGATAAAGAAAAAAAAAGGATGCAATCTTTGGGTCTGAAAGTTTTCACTGATTTTGGGGGAGGAGCATTAACAAAAGGCTCTTGTAATAATTATTCTAGGAATCAAATTAATCATAATTATAATGCAAATGGGTTCACAGATTTCGAGGTGGGTAGCCGTAGAAATTGGTGTTGTTCAATGGGTAATAATAATACTAATGGTGATGGGGGTTTGAGATATCAATATCAATGCAAAATTGTGGCTTGTTCCAATTCTAATTCTCAGAGGAAAACAGGTGGTGGGGAGAGCTCGAGCTCGAGCCCGGACCTGAGCCCGGGCCCGGGTGGGCTTCTTTCTAGGACTCAGAATTATGCCATGCTTAAGCAACAAATGGAGGTGGCTGCCAAAGCTGAGGATTATAGAGAAGCTGCAAGAATACGTGATTTATTAAAATTGTTTGAAGAAGAAGAGCCAGTTTTGCGTTTGAGGAGACTCTTGAAAGAGGCTATTGCTGATGAGAGGTTTGAGGATGCAGCAAAATATCGGGATGAACTCAATGAAATCTCTCCACATTCTCTTTTAAAGTGTTCAAGTGATGCTACTACCTTGGGGATCCGTGTTCAAGTTAGGAGTGTATATATTGAGGGACGTAGTCAGCCTTCAAAAGATCAGTACTTTTTTGCATATAGGATTAGGATAACCAACAATTCAGACCGCCCAGTACAACTCTTAAGGCGGCATTGGATCATAACTGATGCGAATGGGAAAACCGAGAATGTCTGGGGAATAGGAGTTATTGGCGAGCAGCCAGTCATACTTCCGAATACTGGCTTTGAATACTCGTCTGCATGTCCATTAATCACTCCTAGTGGAAGAATGGAGGGTGATTTCGAGATGAAGCATATCGATAAGGTAGGATCAAGGACGTTCAATGTAGCCATTGCCCCTTTCTCACTTTCCATGCTCGAGGATGATATCGACTCTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10376.p1 GENE.R_Transcript_10376~~R_Transcript_10376.p1 ORF type:5prime_partial len:382 (+),score=56.54,DUF525|PF04379.10|5.8e-32,UVR|PF02151.15|1.6e+04,UVR|PF02151.15|0.00032,UVR|PF02151.15|1.5e-07 R_Transcript_10376:1-1146(+)
LATPPPHLPALKVPQKRTVAISDFSTSSNHQQLHSPISLFQLLTSPRKKKKTLQKQKKEDKEKKRMQSLGLKVFTDFGGGALTKGSCNNYSRNQINHNYNANGFTDFEVGSRRNWCCSMGNNNTNGDGGLRYQYQCKIVACSNSNSQRKTGGGESSSSSPDLSPGPGGLLSRTQNYAMLKQQMEVAAKAEDYREAARIRDLLKLFEEEEPVLRLRRLLKEAIADERFEDAAKYRDELNEISPHSLLKCSSDATTLGIRVQVRSVYIEGRSQPSKDQYFFAYRIRITNNSDRPVQLLRRHWIITDANGKTENVWGIGVIGEQPVILPNTGFEYSSACPLITPSGRMEGDFEMKHIDKVGSRTFNVAIAPFSLSMLEDDIDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST