Transcript Information: R_Transcript_103760.p1


Annotated TAIR IDAT2G46340.1
Annotated Gene NameSPA (suppressor of phyA-105) protein family
Annotated Gene Symbol(s)SPA1
Annotation TypeHomolog
Chromosome Positionchr2:19022572-19026821 | Reverse length=1029
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7327514174922
Replicate 20.65684219209562
Replicate 31.1366881655049
Condition 2: 8 Hour
Replicate 11.4527751586823
Replicate 21.6161586659757
Replicate 32.5846953634208
Condition 3: 24 Hour
Replicate 11.3125822902571
Replicate 21.2133961201936
Replicate 32.030574544847


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103760.p1 GENE.R_Transcript_103760~~R_Transcript_103760.p1 ORF type:complete len:927 (+),score=169.20,WD40|PF00400.28|4.3e+02,WD40|PF00400.28|22,WD40|PF00400.28|0.082,WD40|PF00400.28|1.4e+03,WD40|PF00400.28|0.081,Pkinase|PF00069.21|19,Pkinase|PF00069.21|6.5e-05 R_Transcript_103760:293-3073(+)
ATGACTGCTAACAATGTTGTAGAGATTGAGACGGATAATGTAGACTTGCCACTAAAGCAGGAGGAATGCTCACAACATACAAATGATCATTTGGGAGGTCAGGGGTCTTCGATTCATAATTGTGCAAATGCATCAGAGAGTAATGGCTTGGACCAACGTGGGACGTCATTCTTAGGGTTGGAGTCGCCTGGTAATATTGCCCAATCGATTGATCCCATAGGGAATGGGTTCAAAGAGTTGAAAGTTGAAAATTACAAGAACACAGTCTCTGGCGTTGTTGATTTACCTAGTAGCACAACTAACTTGCTTGTGAAGCAGGGACAGTGGTCACATTTGTATAAGTTGGTAGATCGGTCCAAGAATAAGGGTGGTCTTGAAGATCCATTCTCAAGAGCCAAGGATAAGCTTAAGGTTAGCATCCAAGAGAGAAGAGGTGATCCTAATTCATGGCACCTAAGGCATCTGAAGACCAGGCATGTTGATGAAACTGGAGTGTGTGTTGATTTGAAAAAGGGTGAGAATCCCAATTCTGAAAGTCAATTCCTTCATCAGGATGCAAGATTGAAGATTTTGTCCACATCGAGTTTCTCTCAATTTTTTGGAAGTAAAACCCTGAAGGGTAAGGGGGTCATCCATGCACATCCAGGGGACAAAAATGAAATCGCCAGTGGTGCCACTTTCCAGACTACTGAAAGGCTGTTTTCTACAGTAGGCACAGATATTGGTGCCCGAATGCAACTTTTGCAATATCACAATGGTGGGATACAATTGGACTCAAACCATGATGGAATTAGCTTAAGAGATTGGCTTATACGTCGGCATCATGGAAAGAGCAAAGCTGAAAGACTTTTTTATTTCAGGGAAATTGTAGAGCTAGTAAATTTGGCTCACTCTCAAGGACTTGTCCTCCAACACTTGCGGCCATCATACTTCACTTTAATGACCTCAAAGAAGTTGAAGTATATTGGCTTATCAACCCAGGTGGACTCAGATGTCTCTACATCCCAAGTCAGATGCAAAAAAAGGCCACCTGATGATGATATCCATGTTTTTTGTACACCTGACAAGAAGCAACAAAAACTCATCTCAGACTTGAAGTTTCAAAACCATGTACCTCTAGACATCTCCAAAAGTGATTCAAGCATTGCTACACATCAGGAAGCAAATTATGGTATAGATTGTCCATCTGGTTCTGACTCTGGGCCCAAAGTTCTGCGTAGCACCTGCCATCAAGCTACTGAAGTGGAGAAGTCTCTTTTAGCAGACCTGCTGTTGGAAGAAAAGTGGTATGCTTGTCCAGAGGAGCTCGGTGGGAGGGGTTGCAAGTTTTCATCTAATATCTATAGTCTTGGAGTGCTACTTTTTGAGTTGCTTTGCCCTTTTGATTCAATGGAGGCTCGTTCTAATGCATTGTTGGACATGCACCATAGGATTCTGCCACCATTCTTTTTGTCTGAAAGTCCAAAGGAAGCTGGGTTCTGTCTGTGGCTAATCCATCCCGAACCACTCTCACGCCCAACAATAAGAGAAATTCTACTCTCAGACCTGTTCTGCGGAACCCAAGACTGGCATTCAAGTGATGAGATAGCTATATTTGCCAACAATGATGATATGGCTGAGTCAGAACTACTGCTAGATTTTCTAGTTTCTTTGAAAGATCAGAAGCAGGACCATGCAGTGGGTTTAATTGAGGATATTAGATGTATAGAAGCTGACTTAAAAGGACTCAAATCGTTGCCTACATCAAATTCAGGTCTTGTTGAAAAGGATTACAGTCTACAAGACTTCATGAAATTAGTTGCTAGATCTGGTGGGAATGAGGTTAGATTGTTAAACAATATGTCTCAGCTTGAAAAGGCTTACTTTTCAGAACGATCCTCAACTACTGTCACAAGTGGTCCTGATCGTGCTGATAGAGACTTGCTGAAGAACAGAGAAGCTTGGTTCCAGCTACACAAACAGAACGAGGCAGTAAGCAAGAACCAGAAGTCTATTGACGGGCTTGACATTTTCTTTGAAGGACTATGTAAATTTACTTGCTACAGTAAATTTGAGTTGCGTGGAACTTTGAGAAACAATGACCTCCTTAACTCTGCAAATGTGATATGCTCCCTAAGCTTTGATCGTGATGAAGAGTACATTGCTATTGCTGGAGTATCGAAGAAAATAAAGATATTTGAGTATTCTGCTCTTGCAAATGACACTATTGATATCCACTATCCTGTGATTGAGATGGGAAATAAATCCAAGCTTAGCTGCATTTCCTGGAACACCTACATCAGGAACCATTTGGCTTCAACTGATTATGATGGTATTGTTCAGGTTTGGGATGCAAGCACCGGTTTGGGATTTTCTCAGCACATTGAACACCAGAAAAGGGCTTGGTCAGTTGACTTCTCTCAAGTCGACCCAACAAAATTTGCCAGTGGAAGTGATGATTGTTCTGTGAAGCTATGGTGCACTAATGAAAAAAGGTCAACCTCTACTATCTGGAGTCCTGCCAATGTCTGCTGCGTACAGTTTTCTCCGTACTCTTCTCACCTTTTGGCATTTGGGCCTGCTGATTACAAAATCTATTGTTATGATCTTCGGCACACGAGAATTCCCTGGTGTACGTTAGCTGGTCATGAGAAGGCTGTTAGCTATGTCAAATTTCTAGATGCTGAAATGCTTGTTTCTGCTTCTACTGACAATACTTTAAAGCTTTGGAATCTCAACAAAACAAGCCTATCTGGGGCTGTCCTCACAGGCTTGTCATTTAACCTATTGTGGTCACGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103760.p1 GENE.R_Transcript_103760~~R_Transcript_103760.p1 ORF type:complete len:927 (+),score=169.20,WD40|PF00400.28|4.3e+02,WD40|PF00400.28|22,WD40|PF00400.28|0.082,WD40|PF00400.28|1.4e+03,WD40|PF00400.28|0.081,Pkinase|PF00069.21|19,Pkinase|PF00069.21|6.5e-05 R_Transcript_103760:293-3073(+)
MTANNVVEIETDNVDLPLKQEECSQHTNDHLGGQGSSIHNCANASESNGLDQRGTSFLGLESPGNIAQSIDPIGNGFKELKVENYKNTVSGVVDLPSSTTNLLVKQGQWSHLYKLVDRSKNKGGLEDPFSRAKDKLKVSIQERRGDPNSWHLRHLKTRHVDETGVCVDLKKGENPNSESQFLHQDARLKILSTSSFSQFFGSKTLKGKGVIHAHPGDKNEIASGATFQTTERLFSTVGTDIGARMQLLQYHNGGIQLDSNHDGISLRDWLIRRHHGKSKAERLFYFREIVELVNLAHSQGLVLQHLRPSYFTLMTSKKLKYIGLSTQVDSDVSTSQVRCKKRPPDDDIHVFCTPDKKQQKLISDLKFQNHVPLDISKSDSSIATHQEANYGIDCPSGSDSGPKVLRSTCHQATEVEKSLLADLLLEEKWYACPEELGGRGCKFSSNIYSLGVLLFELLCPFDSMEARSNALLDMHHRILPPFFLSESPKEAGFCLWLIHPEPLSRPTIREILLSDLFCGTQDWHSSDEIAIFANNDDMAESELLLDFLVSLKDQKQDHAVGLIEDIRCIEADLKGLKSLPTSNSGLVEKDYSLQDFMKLVARSGGNEVRLLNNMSQLEKAYFSERSSTTVTSGPDRADRDLLKNREAWFQLHKQNEAVSKNQKSIDGLDIFFEGLCKFTCYSKFELRGTLRNNDLLNSANVICSLSFDRDEEYIAIAGVSKKIKIFEYSALANDTIDIHYPVIEMGNKSKLSCISWNTYIRNHLASTDYDGIVQVWDASTGLGFSQHIEHQKRAWSVDFSQVDPTKFASGSDDCSVKLWCTNEKRSTSTIWSPANVCCVQFSPYSSHLLAFGPADYKIYCYDLRHTRIPWCTLAGHEKAVSYVKFLDAEMLVSASTDNTLKLWNLNKTSLSGAVLTGLSFNLLWSR*

Click here to download the sequence:
Link to NCBI Protein BLAST