Transcript Information: R_Transcript_1040.p1


Annotated TAIR IDAT5G57740.1
Annotated Gene NameXB3 Ortholog 2 in Arabidopsis thaliana
Annotated Gene Symbol(s)XBAT32
Annotation TypeOrtholog
Chromosome Positionchr5:23394789-23397145 | Reverse length=508
E-Value1.1E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.294932617316
Replicate 212.702181743561
Replicate 318.287423108531
Condition 2: 8 Hour
Replicate 112.986978093566
Replicate 218.77819911525
Replicate 320.909452012987
Condition 3: 24 Hour
Replicate 116.679290886426
Replicate 211.210407833885
Replicate 315.780914152708


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1040.p1 GENE.R_Transcript_1040~~R_Transcript_1040.p1 ORF type:3prime_partial len:362 (+),score=56.98,Ank_2|PF12796.3|1.9e-14,Ank_2|PF12796.3|8.3e-18,Ank_2|PF12796.3|9e-09,Ank_4|PF13637.2|1.6e+02,Ank_4|PF13637.2|6.5e-15,Ank_4|PF13637.2|1e-05,Ank_4|PF13637.2|0.00014,Ank_4|PF13637.2|0.11,Ank_5|PF13857.2|2.6e+02,Ank_5|PF13857.2|1.1e-07,Ank_5|PF13857.2|0.0019,Ank_5|PF13857.2|0.002,Ank_5|PF13857.2|0.00013,Ank_5|PF13857.2|6.9e-09,Ank|PF00023.26|0.0017,Ank|PF00023.26|0.027,Ank|PF00023.26|0.0065,Ank|PF00023.26|0.0025,Ank|PF00023.26|1e-05,Ank|PF00023.26|56,Ank_3|PF13606.2|1.9e+03,Ank_3|PF13606.2|0.00016,Ank_3|PF13606.2|0.0064,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|0.0012,Ank_3|PF13606.2|0.14,Ank_3|PF13606.2|3.6e+02,Ank_3|PF13606.2|1.6e+04 R_Transcript_1040:1258-2340(+)
ATGAGATTCTTAAGCATAGTGGGGAATTCATTAGGCTGCTCAGCTTCAGGGGAGCGCTTAGTTTCCGCTGCAAGAGATGGTGATCTTCAGGAAGCTAAGGCATTGCTTGAGTACAATCCTCGTCTCGTGAGGTACTCGACTTTTGGTGTTCGAAATTCTCCTTTACATTACTCTGCAGCCCAAGGCCACCATGAGATTGTTACTCTTCTGCTTGAGACCGGAGTTGATATCAATCTAAGGAATTATCGCGGCCAGACTGCATTGATGCAAGCGTGTCAGCATGGTCATTGGGAGGTTGTTCAGACACTGATTCTTTTCAAAGCCAATATTCACCGAGCAGACTATCTTAATGGGGGCACTGCATTGCACTTGGCTGCTTTGAATGGGCATACGCGGTGTATCAGGCTCCTCCTTGCAGATTATATTCCTAGCTTTCCTAATCTTTGGAATATTTTACGGAAGAAAACGAAATTAGATGAAGGAATCTCAGAATTCAATGAAAGTGCCCTCCGTCAGGTGATCAACAAGCCTGCAGATGGAGGCATCACAGCTCTTCATATGGCTGCACTGAATGGGCATTTCGAAACTGTCCAATTACTATTGGATTTAGGAGCTTCTGCTACTGAAGTAACTGTTGAAGATGGCACTACAATAGATCTTATAGGTGCGGGAAGCACTCCTCTTCATTATGCAGCTTGTGGCGGAAATGCTCAATGTTGTCAAATTTTGATTGCTAGGGGTGCTAGTTTGACAGCTGAAAATGCAAATAGATGCACGCCTTTGATGGTGGCTCATTCATGGCATAGAGATTCGATTGTTGAAATGCTTTCAACCCCACAAGATATAAGGGTGCCAGCCATTCCTTCTCCTTATCTTTGTCTTCCCCTGATGAGTATTATCAAAATTGCAAGAGAATGTGGCTGGAGAAATCCGGATTATTTACCAACATCCCAAGATCCCTGTGTTGTCTGTCTAGAAGGAAAGTGCACTGTAGCTTCTCAAGGTTGTAATCATGAGTTCTGCACAAAGTGCGCTCTATACCTCTGTACAATGAACTGCTCCTCAACTGTTGCCAAAGGCCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1040.p1 GENE.R_Transcript_1040~~R_Transcript_1040.p1 ORF type:3prime_partial len:362 (+),score=56.98,Ank_2|PF12796.3|1.9e-14,Ank_2|PF12796.3|8.3e-18,Ank_2|PF12796.3|9e-09,Ank_4|PF13637.2|1.6e+02,Ank_4|PF13637.2|6.5e-15,Ank_4|PF13637.2|1e-05,Ank_4|PF13637.2|0.00014,Ank_4|PF13637.2|0.11,Ank_5|PF13857.2|2.6e+02,Ank_5|PF13857.2|1.1e-07,Ank_5|PF13857.2|0.0019,Ank_5|PF13857.2|0.002,Ank_5|PF13857.2|0.00013,Ank_5|PF13857.2|6.9e-09,Ank|PF00023.26|0.0017,Ank|PF00023.26|0.027,Ank|PF00023.26|0.0065,Ank|PF00023.26|0.0025,Ank|PF00023.26|1e-05,Ank|PF00023.26|56,Ank_3|PF13606.2|1.9e+03,Ank_3|PF13606.2|0.00016,Ank_3|PF13606.2|0.0064,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|0.0012,Ank_3|PF13606.2|0.14,Ank_3|PF13606.2|3.6e+02,Ank_3|PF13606.2|1.6e+04 R_Transcript_1040:1258-2340(+)
MRFLSIVGNSLGCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVTLLLETGVDINLRNYRGQTALMQACQHGHWEVVQTLILFKANIHRADYLNGGTALHLAALNGHTRCIRLLLADYIPSFPNLWNILRKKTKLDEGISEFNESALRQVINKPADGGITALHMAALNGHFETVQLLLDLGASATEVTVEDGTTIDLIGAGSTPLHYAACGGNAQCCQILIARGASLTAENANRCTPLMVAHSWHRDSIVEMLSTPQDIRVPAIPSPYLCLPLMSIIKIARECGWRNPDYLPTSQDPCVVCLEGKCTVASQGCNHEFCTKCALYLCTMNCSSTVAKGP

Click here to download the sequence:
Link to NCBI Protein BLAST