Transcript Information: R_Transcript_104009.p1


Annotated TAIR IDAT5G22340.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7394509-7396609 | Forward length=340
E-Value1.8E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3081522750268
Replicate 22.9994714880426
Replicate 32.7032795920925
Condition 2: 8 Hour
Replicate 15.7032294131782
Replicate 25.9721609886396
Replicate 35.3552888476297
Condition 3: 24 Hour
Replicate 13.1370916708664
Replicate 21.8493540063528
Replicate 33.6706088605356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104009.p1 GENE.R_Transcript_104009~~R_Transcript_104009.p1 ORF type:complete len:322 (+),score=55.48 R_Transcript_104009:471-1436(+)
ATGGAGACTCTATCAAGGGTAAGCTGGCTACAATTCACCAGATGCCCTTCCTTGGGAAGAATACCCAATAAGATTACCATTTTCCCACAGTATGACTTTACTCTCAGAAGTAGAATGCCCACAGTCTCGGTCCTCAAGACCCCTTCTTCTGCTAGTGAACGTGCAGAAGAAGATCTCCTTGGAGAATTTTTTCGGGATAGACAGTTAAATGGGGATCTCATAACAAGATATTCTGATTTTCTTTACCAGAGGAGAATGATGAGAGTTGACGTTGCAGATGCTGGGGAAGTAGCTGGCAGTTCTCAACCAACTGAGGGGGCCTTGGTTGATGAGCCTGAGGGAGGCTTTTTAAAATTGACAAAAACTCAAGAATGGTTGCTAGGTGAAACATCTCCACCACTCAATAGGAAGCCAACAAATACGGAACTGCAGGACGATAGAGATAGAACAAGAAGACTCAACATTCTTAGATATGAAGCTCTTAAGAGGGAACTTCTGTTCATGACTTTGGGGGTAGGAGCTGCATGTACTGGGTATTGCTTGTTAACCTTGTCAGTCCAGGCAGCAGTGAGCTATGCTTCAGGAGTTGGATTCAGTTGCGTGTATTTACAACTCTTGTCCCAGCATGTGGACAACTTATCCAAGGATTCGGTTCCGCAGATATTCACGCAAAAGAAGAAAAAGAAAATTGGGATACGAAGTGAGGATTTGCAAGATCTAGTAGAAAGATCAGTAAAGGGCAGTGGTATTGCTCTTTCTTCTCCAAGGCTTGTAATCCCAGCAGCATTATATGGATTGTGGGTCCTTCTTCACCGTAACTTCGCTAGTGATCTCTTTGATTTCCAGATTGTGCCTGCTATGCTGGGAATGTTTGCTTATAAAGCTGCTGCGCTTGTTCAAGTTTATAGAGACAACGAAGACTTAAGATTCATATTTCCTGATGATGAGGAAAGCTCTGATGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104009.p1 GENE.R_Transcript_104009~~R_Transcript_104009.p1 ORF type:complete len:322 (+),score=55.48 R_Transcript_104009:471-1436(+)
METLSRVSWLQFTRCPSLGRIPNKITIFPQYDFTLRSRMPTVSVLKTPSSASERAEEDLLGEFFRDRQLNGDLITRYSDFLYQRRMMRVDVADAGEVAGSSQPTEGALVDEPEGGFLKLTKTQEWLLGETSPPLNRKPTNTELQDDRDRTRRLNILRYEALKRELLFMTLGVGAACTGYCLLTLSVQAAVSYASGVGFSCVYLQLLSQHVDNLSKDSVPQIFTQKKKKKIGIRSEDLQDLVERSVKGSGIALSSPRLVIPAALYGLWVLLHRNFASDLFDFQIVPAMLGMFAYKAAALVQVYRDNEDLRFIFPDDEESSDG*

Click here to download the sequence:
Link to NCBI Protein BLAST