Transcript Information: R_Transcript_104126.p1


Annotated TAIR IDAT1G49230.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18209320-18209979 | Forward length=219
E-Value6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.300908469484
Replicate 25.4772957607734
Replicate 310.158640151337
Condition 2: 8 Hour
Replicate 19.4749651317601
Replicate 29.527680088853
Replicate 33.8670822626042
Condition 3: 24 Hour
Replicate 13.1941297012458
Replicate 21.6301713093035
Replicate 31.9032786684259


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104126.p1 GENE.R_Transcript_104126~~R_Transcript_104126.p1 ORF type:complete len:230 (+),score=20.72,zf-RING_2|PF13639.2|4.6e+03,zf-RING_2|PF13639.2|1.4e-15,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|1.1e-12,zf-rbx1|PF12678.3|2.9e+03,zf-rbx1|PF12678.3|6.5e-09,zf-C3HC4|PF00097.21|5e+03,zf-C3HC4|PF00097.21|4.3e-07,zf-C3HC4_2|PF13923.2|4.9e+02,zf-C3HC4_2|PF13923.2|1.6e-06,zf-ANAPC11|PF12861.3|1.6e+04,zf-ANAPC11|PF12861.3|5.3e-06 R_Transcript_104126:108-797(+)
ATGTTGCCTTCAACTTCCTCTAGTTTTGAACTTCCCCAAAACATTTTAGCCAACATTCAATATTATCCTAGAAGGTTGCTCTCAGAAACTCCACTATACCATTTAAAACCAACAACACCACCAGCACCTCCACCAAATGACCTACTACTAGACCACTCCTCGGCGCGTGGTGATTTTAATGCAAACTTAATCATGGTTGTTACGGTCCTATTATGCGCCTTAATCTGCTCGTTATGCATTAGTTGCATAATTAGGTGCGTGATTAAGTGCACGAGCTTGATCAACCAAGAGCCTAACTACAACATAAACACAATTAGCCATGAGGTGATAATTACCAAAAGTGGCATAGATAAGAGGGCATTGAGGACATTTCCTATAGTGAAGTACTCAAAAGAGGTCAAGATTCAGGGGTTAGACACAGACTGTGTGATATGCTTGTCAGAGTTTAAGGGAGGAGAGAAACTAAGGATTTTGCCCAAATGCAACCATGGTTTCCATGTTAAGTGCATTGATAAGTGGCTTAATTCTCACTCATCTTGCCCTACTTGCAGGCAGTCTTTGGTTGACACTTGTCAGAAGATCATTGGTTCTGATGATCATCAAACAGGGGAGATGGTTACTATAAGTATTGTGCGACTAGAAAGGGAAGATTTGGTCAGAAATTATAGGGGACAAGTTTCTCAAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104126.p1 GENE.R_Transcript_104126~~R_Transcript_104126.p1 ORF type:complete len:230 (+),score=20.72,zf-RING_2|PF13639.2|4.6e+03,zf-RING_2|PF13639.2|1.4e-15,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|1.1e-12,zf-rbx1|PF12678.3|2.9e+03,zf-rbx1|PF12678.3|6.5e-09,zf-C3HC4|PF00097.21|5e+03,zf-C3HC4|PF00097.21|4.3e-07,zf-C3HC4_2|PF13923.2|4.9e+02,zf-C3HC4_2|PF13923.2|1.6e-06,zf-ANAPC11|PF12861.3|1.6e+04,zf-ANAPC11|PF12861.3|5.3e-06 R_Transcript_104126:108-797(+)
MLPSTSSSFELPQNILANIQYYPRRLLSETPLYHLKPTTPPAPPPNDLLLDHSSARGDFNANLIMVVTVLLCALICSLCISCIIRCVIKCTSLINQEPNYNINTISHEVIITKSGIDKRALRTFPIVKYSKEVKIQGLDTDCVICLSEFKGGEKLRILPKCNHGFHVKCIDKWLNSHSSCPTCRQSLVDTCQKIIGSDDHQTGEMVTISIVRLEREDLVRNYRGQVSQT*

Click here to download the sequence:
Link to NCBI Protein BLAST