Transcript Information: R_Transcript_104133.p1


Annotated TAIR IDAT1G30290.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10670320-10672740 | Reverse length=806
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3865856938373
Replicate 21.3218009947306
Replicate 31.7193919261035
Condition 2: 8 Hour
Replicate 12.2825806306754
Replicate 22.5717721245916
Replicate 33.7797542696205
Condition 3: 24 Hour
Replicate 13.0851290584445
Replicate 21.9224923003893
Replicate 32.9148275006764


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104133.p1 GENE.R_Transcript_104133~~R_Transcript_104133.p1 ORF type:complete len:826 (+),score=151.33,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|0.094,PPR_2|PF13041.2|6.6e-11,PPR_2|PF13041.2|3.3e-14,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|8.5e-11,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|3.6e-19,PPR_2|PF13041.2|7.4e-06,PPR_2|PF13041.2|8.7e-07,PPR_2|PF13041.2|9.8e-06,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|3.1e+03,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|74,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|3e-11,PPR_1|PF12854.3|0.087,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|6.4e-13,PPR_1|PF12854.3|9.9e-08,PPR_1|PF12854.3|3.7e-05,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|3.3,PPR|PF01535.16|0.054,PPR|PF01535.16|0.0061,PPR|PF01535.16|0.38,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|0.0038,PPR|PF01535.16|7.5e-05,PPR|PF01535.16|0.14,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.0073,PPR|PF01535.16|1.1,PPR|PF01535.16|31,PPR|PF01535.16|2.7e+03,PPR_3|PF13812.2|36,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|6.7e+02,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|8.1,Clathrin|PF00637.16|2e+03,Clathrin|PF00637.16|0.022,Clathrin|PF00637.16|2.1e+02,Clathrin|PF00637.16|2.4e+02,Clathrin|PF00637.16|2.8e+02,Clathrin|PF00637.16|1.6,ATP13|PF12921.3|2.9e+03,ATP13|PF12921.3|1.3e+02,ATP13|PF12921.3|1.9e+02,ATP13|PF12921.3|3.7e+03,ATP13|PF12921.3|1.1e+03,ATP13|PF12921.3|2.6e+02,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|15,ATP13|PF12921.3|53,ATP13|PF12921.3|4.6 R_Transcript_104133:153-2630(+)
ATGCCTGTCAAAGAACTCATCCGTAAGTTCAGAAGGACATCAGCACATCAATCGCCTGGTAATCTGTTCACTGCTTATTTTCCCGCACTTTCATATTCTGATTCCAAATCTCAATCAAACCATCATCTGGTGAATGAGAAACATGATATTGGCAGAAGTGATCAACAATATTCTAGGAACAAGCAACTGGATTCCAAGAAAAGTTTATATTTGAGGTCTAATTTGGGAAGATCATGGAGGCAGAAAAATGGTTTTGATAAAAGAGGTGGTGGGTTTGATGGAGATCAGCTTGTGGGTTCCACTAAAAATCGTAGGTTGGGTTCTTTTGGGAATTCCTTCAAGAATCTGCAAAATGAAGCAGTTTTATTTAGTGAAGGACTAGATAAAGCTGATGTTGTTATTGATGATGGATTTAGGCTTTTGGACGAATATAATGAGGGTCGGCAAAGTCAGTGTGGTATAAGATATGAGAAGAATGAGGATGAATTTAGGCATCCATTGGTTAAAGAAACATGTAGGCTAATAGCTGAGAGATCAAAGTGGAACCCTGACCATGAAGAGCAATTAAGACATTTACTGAGAAGCCTCAAGCCCCGTCAAGTTTGTGCAGTCTTGCACTTGCAGGCTGATGAACGGGTAGCATTGGAGCTCTTTTATTGGGCTGATAGGCAATGGCGGTATCGCCATGACCCTGTTGTTTACTATGCCATGCTTCAAGTGCTAAGCAAGACTAAATTGTGTCAGGGTGCTAGGAGGGTTCTCCATCTCATGCGCAGGAGGGGTGTCCAGTGCAGTCCAGAGGCATTTGGTTATTTGATGATTTCTTATAGCAGGGCAGGAAAATTAAGGCATGCAATGAGTGTTCTCACTATGATGGAAAAATCTGGGGTTCATCCTAACCTGTGTATATGTAATAATACCATCCATGTTTTAGTTATGGCCAACAGGCTGGACAAAGCTTTGAAATTCCTTGAGAGGATGCAAATTGTCGGAATATTACCTGATATTGTTACATATAACTGCTTGATTAAGGGTTATTGTTGTATGCGAAGAGTGAAAGATGCCATAGCTTTGATTGATGATATGCCTCTTAGGGGATGTGCCCCTGATAAAGTTAGTTTCTATACCGTAATGGCCTACTTCTGTAAGGAGAACAACATGCCTGAATTAAAGGGATTACTTAAGAAAATGATGGACCATAACTTGCAGCCAGATATGGTCACATATAATAATCTCATACATATGCTTTGCAAACATGGCCACAGTGATGAGGGTTGTGAATTTCTACGAGAAGCACAGGAGCAAGGATTTCGAGTGGATAAAGTTGGTTACACTGCTGTAGTTCATGCGTTATGTCAGGAAAGAAAGATAGACAAGGCAAAAGAGATTGTGCATGAGATGTTAGAAAAGGGTTGCCTTCCAGATGTAGTGACTTATACTGCTCTTCTAGATGGGTTTTGCCGGGTGGGGAATGTAGATGAAGCTAAGATTATCCTTCAGCAAATGTATAAAAATGGCTGTAAACCAAACACTGTATCATATACAGCCTTGCTAAATGGCCTTTGTCGAACTGGGAGCTCATCTAAGGCTCAAGAGATGATGAATATGAGCGAGGAAGATTGGTGGATGCCAAATGCCATCACATATAGTGTTTTGATGCATGGTTTCCTTAGAGAAGGAAAGTTGTTTGAGGCATGTGATGCTGTCAGGGAGATGATTACAAAGGGCTTTCTTCCATCTCCTGCTGAGGTCAACTTGTTGCTTTTATCACTATGTCGAGAAGGAAGAACAAATGAGGCTAAAAGGTTCATGGAAGAGTGTCTAAACAAAGGATGCGATGTTAATGTCGTAAACTTTACAACTGTCATTCACGGATATTGTCAAAAAGATGATTTAGAAGGTGCTCTTTCTTTACTTGATGACATGTATTTGGTCAACAAACGGCCTGATGTTATGACATATACAACCATAGTTGATGCATTGGGTAAAAGGGGTAAAATTGAAGAGGCAAATGATGTCATAAAGAAGATGTTAGGGAGGGGTATACTTCCTACTCCTGCTACATATCGGTCCATCATTCATCGTTACTGTCAGAATGGTCGGGTGGAAGATCTGTTGAAGCTGTTGGAAAAGCTGCTCCCTAAGCAGCCATACAACACTGCCTACAATCAAGTTATTGAAAAGCTTTGTAGTTTTGGATGCATAAGTGAGGCTTATAGAATTTTAGGTGAAGTTCTGAGAACAGCTTCGAGAATTGATGCTCACACTTGCCATGTACTTATGCAAAGTTGTTTAAGGAGAGGAAATCCTCTTTTAGCATACAAAGTTGCTTGTAGAATGTTTAACCGGAATTTAATACCTGACTTAAGGCTATGTAAGAAGGTGAGCAAGAGGCTGAGGTTAGATGGAAGCATCAAAGAGGCTGATAATCTTATGATGCGGCTTGTTGAGCATGGTCTCATATCTCCTTTGGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104133.p1 GENE.R_Transcript_104133~~R_Transcript_104133.p1 ORF type:complete len:826 (+),score=151.33,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|0.094,PPR_2|PF13041.2|6.6e-11,PPR_2|PF13041.2|3.3e-14,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|8.5e-11,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|3.6e-19,PPR_2|PF13041.2|7.4e-06,PPR_2|PF13041.2|8.7e-07,PPR_2|PF13041.2|9.8e-06,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|3.1e+03,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|74,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|3e-11,PPR_1|PF12854.3|0.087,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|6.4e-13,PPR_1|PF12854.3|9.9e-08,PPR_1|PF12854.3|3.7e-05,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|3.3,PPR|PF01535.16|0.054,PPR|PF01535.16|0.0061,PPR|PF01535.16|0.38,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|0.0038,PPR|PF01535.16|7.5e-05,PPR|PF01535.16|0.14,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.0073,PPR|PF01535.16|1.1,PPR|PF01535.16|31,PPR|PF01535.16|2.7e+03,PPR_3|PF13812.2|36,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|6.7e+02,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|8.1,Clathrin|PF00637.16|2e+03,Clathrin|PF00637.16|0.022,Clathrin|PF00637.16|2.1e+02,Clathrin|PF00637.16|2.4e+02,Clathrin|PF00637.16|2.8e+02,Clathrin|PF00637.16|1.6,ATP13|PF12921.3|2.9e+03,ATP13|PF12921.3|1.3e+02,ATP13|PF12921.3|1.9e+02,ATP13|PF12921.3|3.7e+03,ATP13|PF12921.3|1.1e+03,ATP13|PF12921.3|2.6e+02,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|15,ATP13|PF12921.3|53,ATP13|PF12921.3|4.6 R_Transcript_104133:153-2630(+)
MPVKELIRKFRRTSAHQSPGNLFTAYFPALSYSDSKSQSNHHLVNEKHDIGRSDQQYSRNKQLDSKKSLYLRSNLGRSWRQKNGFDKRGGGFDGDQLVGSTKNRRLGSFGNSFKNLQNEAVLFSEGLDKADVVIDDGFRLLDEYNEGRQSQCGIRYEKNEDEFRHPLVKETCRLIAERSKWNPDHEEQLRHLLRSLKPRQVCAVLHLQADERVALELFYWADRQWRYRHDPVVYYAMLQVLSKTKLCQGARRVLHLMRRRGVQCSPEAFGYLMISYSRAGKLRHAMSVLTMMEKSGVHPNLCICNNTIHVLVMANRLDKALKFLERMQIVGILPDIVTYNCLIKGYCCMRRVKDAIALIDDMPLRGCAPDKVSFYTVMAYFCKENNMPELKGLLKKMMDHNLQPDMVTYNNLIHMLCKHGHSDEGCEFLREAQEQGFRVDKVGYTAVVHALCQERKIDKAKEIVHEMLEKGCLPDVVTYTALLDGFCRVGNVDEAKIILQQMYKNGCKPNTVSYTALLNGLCRTGSSSKAQEMMNMSEEDWWMPNAITYSVLMHGFLREGKLFEACDAVREMITKGFLPSPAEVNLLLLSLCREGRTNEAKRFMEECLNKGCDVNVVNFTTVIHGYCQKDDLEGALSLLDDMYLVNKRPDVMTYTTIVDALGKRGKIEEANDVIKKMLGRGILPTPATYRSIIHRYCQNGRVEDLLKLLEKLLPKQPYNTAYNQVIEKLCSFGCISEAYRILGEVLRTASRIDAHTCHVLMQSCLRRGNPLLAYKVACRMFNRNLIPDLRLCKKVSKRLRLDGSIKEADNLMMRLVEHGLISPLG*

Click here to download the sequence:
Link to NCBI Protein BLAST