Transcript Information: R_Transcript_104145.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4030404918248
Replicate 24.5244553085626
Replicate 35.6302755707715
Condition 2: 8 Hour
Replicate 10.65955191777091
Replicate 20.30115665779375
Replicate 30.42781573852764
Condition 3: 24 Hour
Replicate 10.54109309964286
Replicate 20.37130065472352
Replicate 32.137183285926


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104145.p1 GENE.R_Transcript_104145~~R_Transcript_104145.p1 ORF type:5prime_partial len:297 (+),score=42.32,Transposase_24|PF03004.10|1.2e-10 R_Transcript_104145:3-893(+)
GATGATCATAGTCGTGCCGACGGTGGAGAAGAGATAAGAAGAGGGATCACTGTTTTAAGGAAAGTAGTTAGAGCAAGAAGTAAATGCAAACGATATGAAGTTGGGTGGAATAGATTTGGTCAGCCAGTCAACCCTAACAAAGACCTTTTTATTAGTTACATTGGGAGAGCTGTTAGGTTGTCGGTGCCGATAACTTTTAATAATTGGCGTCATGTCCCAATCACACACAAGACTACAGTCTGGGACGATGTATCGTCGGCGTTCATAATTGGTGAAAATAGGAAAAAGTTTGTATTGAATGAAGCAGGAAAGCTTCTGAGGGTGTTTAGGGCTTACTTGAGCAGAAATTTTCTGAGGGATGAAAACGGAAACGTAAATGAACATCCTCCTACAATATATGCCGATATCATATCGGTAGAAACATGGAAGGCATTTGTAACTATGAGGCTAAAAGACTCTTTCCAGGAGTTGAGTGAAGTAAATCGCAAAAGAGCTCTAATACCGAAGCATCCTTTCAGGAAAGCACGTACAGGTTATGCTGGCCTAAGACAGAAAATGGAGGAAAAGGCAGGCGGACCAATTTCTCGGGCATTATTGTGGAGAGAGGGACACACTAACAAAAGTGGTGATATTGTGGATGAATCTGTGAAAGAAGTGGTTAAAAAAATTGAATCCTTGTCAGAATCAGCATCTCGAGGCGAGATATTGGATGATGGGTTGCACGATGTCCTAGCACAAGCATTAGGACTCCCAGAATATGGAGGACGTGCAAGAGCTTTTGGTTTTGGTGTCTCTCAAAGTGATGCATTTTCTTCGAGAGAGCAAGACGTAGGGCAAACAGAGCTTGAGGTGGTATCCTTGAGAGGGTTGGTGAACACACTCCAACATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104145.p1 GENE.R_Transcript_104145~~R_Transcript_104145.p1 ORF type:5prime_partial len:297 (+),score=42.32,Transposase_24|PF03004.10|1.2e-10 R_Transcript_104145:3-893(+)
DDHSRADGGEEIRRGITVLRKVVRARSKCKRYEVGWNRFGQPVNPNKDLFISYIGRAVRLSVPITFNNWRHVPITHKTTVWDDVSSAFIIGENRKKFVLNEAGKLLRVFRAYLSRNFLRDENGNVNEHPPTIYADIISVETWKAFVTMRLKDSFQELSEVNRKRALIPKHPFRKARTGYAGLRQKMEEKAGGPISRALLWREGHTNKSGDIVDESVKEVVKKIESLSESASRGEILDDGLHDVLAQALGLPEYGGRARAFGFGVSQSDAFSSREQDVGQTELEVVSLRGLVNTLQH*

Click here to download the sequence:
Link to NCBI Protein BLAST