Transcript Information: R_Transcript_104162.p1


Annotated TAIR IDAT5G59800.1
Annotated Gene Namemethyl-CPG-binding domain 7
Annotated Gene Symbol(s)MBD7, ATMBD7
Annotation TypeOrtholog
Chromosome Positionchr5:24094752-24096422 | Reverse length=306
E-Value3.5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2151651644076
Replicate 21.4269330380008
Replicate 32.5575483723859
Condition 2: 8 Hour
Replicate 12.1395415973321
Replicate 21.9538634618512
Replicate 32.7315530545242
Condition 3: 24 Hour
Replicate 11.0030109953851
Replicate 23.3189952699412
Replicate 33.1875298087714


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104162.p1 GENE.R_Transcript_104162~~R_Transcript_104162.p1 ORF type:5prime_partial len:206 (+),score=36.10,MBD|PF01429.15|7.2e-10 R_Transcript_104162:2-619(+)
CCTAGAAAAAAACAAACCAATTGTCTAGTGCCCTATCAAAATCCTGGTCCCTTCAGAAGAGTTGTATATGGTGGGAAGTTTTTGAGGCAAGATGAGTTGGAAGAGGCACGTCACAGTGAATTAGACAACATTGTCCCCGCCACTTTACAACCCAGGTCACCTTCCTTGATTCCTGATGGCTGGATTGTGGAGGAGGTTCCACGGAAAGGTGGCCTGAGGTGTGACAGGTATTATATTGAGCCAGTAAGAGGTCAGAAATTCCGATCTGTACCAGAGGTTCAGAGATACTTGGCAGGAGAAAACTATAGATCTAGATGTAGGGCATTAACATTGTGCAATCATGCAACGGGTCCACGTAGTCCAGCTCCACAGAGGAAAAAAACTTCAGTTAAGATGCCCAAGGACTCAATTTTCGATCTTACTAACCCTCCAGAAAAGGTTAATTGGATATTCAACAGTGATGGGAGAGAGAATTGGAGCCCCCTTGTAGAAGAAGGTGTGCTTCCTGATCATATAAAGGAACACTGGGCTGAAACATTCTTGCTCGGAATGAATGGATGGAAGCATCAAGTTCCACAGCTGACAATGAGTGATAATAATCAGGCGAAAAATGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104162.p1 GENE.R_Transcript_104162~~R_Transcript_104162.p1 ORF type:5prime_partial len:206 (+),score=36.10,MBD|PF01429.15|7.2e-10 R_Transcript_104162:2-619(+)
PRKKQTNCLVPYQNPGPFRRVVYGGKFLRQDELEEARHSELDNIVPATLQPRSPSLIPDGWIVEEVPRKGGLRCDRYYIEPVRGQKFRSVPEVQRYLAGENYRSRCRALTLCNHATGPRSPAPQRKKTSVKMPKDSIFDLTNPPEKVNWIFNSDGRENWSPLVEEGVLPDHIKEHWAETFLLGMNGWKHQVPQLTMSDNNQAKNA*

Click here to download the sequence:
Link to NCBI Protein BLAST