Transcript Information: R_Transcript_10419.p1


Annotated TAIR IDAT1G71210.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26838850-26841489 | Reverse length=879
E-Value4E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1264804773594
Replicate 24.2469789478421
Replicate 36.039049002622
Condition 2: 8 Hour
Replicate 16.4553643951828
Replicate 25.564810367295
Replicate 310.210280973968
Condition 3: 24 Hour
Replicate 19.73097965447
Replicate 27.0426451684684
Replicate 38.6555923080003


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10419.p1 GENE.R_Transcript_10419~~R_Transcript_10419.p1 ORF type:complete len:880 (+),score=161.12,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|0.068,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|7e-08,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|32,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|4.2e-05,PPR_2|PF13041.2|7.8e-07,PPR_2|PF13041.2|2.6,PPR|PF01535.16|0.074,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.051,PPR|PF01535.16|0.12,PPR|PF01535.16|2.6,PPR|PF01535.16|0.16,PPR|PF01535.16|1.9,PPR|PF01535.16|0.85,PPR|PF01535.16|0.16,PPR|PF01535.16|13,PPR|PF01535.16|0.32,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.44,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|0.2,PPR|PF01535.16|0.0018,PPR|PF01535.16|72,PPR|PF01535.16|0.022,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|73,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|4.2,PPR_1|PF12854.3|32,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|45,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|0.00015,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|36,PPR_3|PF13812.2|7.2e+03,PPR_3|PF13812.2|33,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|6 R_Transcript_10419:218-2857(+)
ATGGGGGTGCCAATCATCATTAGAACACTAAAGACTCGATCTTCTCTTACCCCACTTATTTTCTCAACCAATTTTTCATCATTATCTTCCATGAAAATCCTTAATCTCCAAAACCCATCTATAATTCGTCAACAAATTAAAAACCCCTCTTCAGAATCTCGTGTTATTGTCACTTCCTTCAGGGATTGGTTCAAAACTGCTAACAACCCTTTACTTGAAAGGATTTTCCAGATTCTTAGTAATAATAAGGGTAATGAAGATCTAACCTTTTCTACTAGTGTTGATGTGGGTCTTTCTCAATTGGGCATTAGATTGTCTGATTCATTTGTTCTTCAAGTTCTTGATTATAGAAAAGATGATGTTTTGTCTTGCTTGAAATTCTTTGATTGGGCTGGTAGACAAACAGGGTTTCATCATTCTCGTGCTACTTTTATTGCTATCTTTAAGATTTTGTCTAGGGCTAAGCTTACTTCGTTAATGGTTGACTTGTTGGATACTTATGTTAAAGACAATCACTTTCATAAGGTTAGGTTTAATGATATTCTTGTCATTGGTTATGCTCTTGCTGGTAAAGTTGACATTGCCCTCCAAGTGTTTGGAAAAATGCGCTTTCATGGGATGGATTTAGATGTGGTTGCTTATCATGTCCTCGCTAATGCACTTGTCGAGGAGGGTTGTTTCGATGCTGTGGGTTCTGTGTTGGGTCAGATTCAGATGTTTGGGCATGAGAACGTGGTTACACATTCCATAACTATGAAGAGTTTGTGCAAGCAGGGTAAGCTGGATGAGGCGGAGGAGTACTTGCGTGGGTTGTTGAGTAGGGAAAAGGTAGTTGTTTCAGGGCATGTGCTAGGTGTTCTCGTCGATGCCCTTTGTAAGAACGGTATGTTTTTGCATGCTGGTAAGTTGATTCATGAGTTTGGGGAGATGGGAGTTGTTCCTATGCAGGAGGCTTATGGCATTTGGATTAGGGACCTTGTACAAGCGGGGAAGATAGATGGAGCTATGGAGTTCTTCCAGACTAAGAAGTCTCTTGAAGGGTATATTCCTGAGGTGTTCCGTTATAACTTTTTGATGCATAGGCTTCTTAGGGAGAATCGTCTTGAGGAGGTTTCCGATTTGTTGATGGATATGAAGGAGAGTCAAATCATGCCTGATAAGCTCACTATGAATATTGCGCTGGCCTTCTTTTGCAAGGCTGGTTTCATGGATGTTGCCCTTGAGTTGTATAAGATGAGGTCCGAGTTTGGGTTTACCCCAAATAGCTTGGTTTACAATTATCTAATAAACAATTTATGTGGAGATGGTAGCACGGATGAAGCATACAGGGTGCTGAAGAATTCAATGATTCAGGGTTGCTTTCCTGGTAAGAGGACCTTCTCTATTCTTGCTGATGCGCTGTGTAGGGAGGGCAAGCTTGATAAGATGAAGGACCTCGTTTTGTTTGCCTTGGAGTGCAAATTCATGCCAGCTATTTCCACGTACGAGAAATTCATTAAAGCCCTTTGTAAGGCTAGAAGGGTTGAAGATGGTTACTTAATTCACGGAGAGCTCAGCAGATTGAATAAAGAAATGAGTGAATGTACATACTCTTACTTGATACATGGCTTCAAGGACGTTAGCAGGGGAGACATTGCTGCTAGACTTCTTATTGAAATGCAAGAAAAAGGCCATAAACCATCACACAAACTGTTTAGAGCTGTCATCTGTTGCTTATGTCAGATGGAGAGTCCTGAAAAGCACTTTCTTCAGTTGCTGGAGATGCAATTGTCTTCCTTCGGACCTAAGCAGCCTGTGCTCAATTTCTTCATTGATGGGGCTGGGCATGCCAGACGTCCCGAGCTTGCTAGAGAAGTTTATGGGATGATGAAGAGAATCGGCAGTGGCCCCAATTTGAGCTCAGACATTCTAATGCTGCAGTCTTACTTAAGGAGTGAGAGGATAGCTGATGCACTGAACTTTTTTGAGGATGTGAGCAAAAGTAGAAAGGTAGGTAGGAAACTGTACAATGCCATGGTGGTTGGCCTTTCCAAAGTGGGAAAAGCAGAATTTGCTTTGGCCTTATTGAACGAAGAGAGAAATGAAGGTCTTGTGCCAAGTTTGGAATGCTATGAAGAGCTTATCAAGTTGTACTGCTCAGAGAAGAAATATGATGAAGCTATAAAACTAGTCAATGACATGGAGAAAGCTGGACGAAGAATTTCATCATTTATCGGCAATATATTTTTGTTACACTCTCTGCAATCTACGGATCTCTGCAAGGCATGGATTCGTTCACGAGATGTATCCAATGAGACGCCTAGTAGTTCAATGCTTGGCCAGTTGATTACTGCGTTTTCTGGCCTTATTAGGGTGACTTCTAATGTTGAGGACTTGGAAAATGTTGTTCAAAGGTGCTTTCCGCTTGACCTCTACTCCTATAACCTCCTGCTGAGAAAATTAAGCATTGATCAGATGGATGAAGCTTGTCAATTATTCAAACGATTATGTCAGATTGGTTATGAACCAAATAGATGGACTTATGACATACTTGTGCATGGCCTTTTTAAGCATGGTAGAATAACTGAAGCCAAAATCTGTGCTAAAGAAATGTTACGGCAGGGACATTTTCCGACTGAACGCATGAAGCTATTAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10419.p1 GENE.R_Transcript_10419~~R_Transcript_10419.p1 ORF type:complete len:880 (+),score=161.12,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|0.068,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|7e-08,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|32,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|4.2e-05,PPR_2|PF13041.2|7.8e-07,PPR_2|PF13041.2|2.6,PPR|PF01535.16|0.074,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.051,PPR|PF01535.16|0.12,PPR|PF01535.16|2.6,PPR|PF01535.16|0.16,PPR|PF01535.16|1.9,PPR|PF01535.16|0.85,PPR|PF01535.16|0.16,PPR|PF01535.16|13,PPR|PF01535.16|0.32,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.44,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|0.2,PPR|PF01535.16|0.0018,PPR|PF01535.16|72,PPR|PF01535.16|0.022,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|73,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|4.2,PPR_1|PF12854.3|32,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|45,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|0.00015,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|36,PPR_3|PF13812.2|7.2e+03,PPR_3|PF13812.2|33,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|6 R_Transcript_10419:218-2857(+)
MGVPIIIRTLKTRSSLTPLIFSTNFSSLSSMKILNLQNPSIIRQQIKNPSSESRVIVTSFRDWFKTANNPLLERIFQILSNNKGNEDLTFSTSVDVGLSQLGIRLSDSFVLQVLDYRKDDVLSCLKFFDWAGRQTGFHHSRATFIAIFKILSRAKLTSLMVDLLDTYVKDNHFHKVRFNDILVIGYALAGKVDIALQVFGKMRFHGMDLDVVAYHVLANALVEEGCFDAVGSVLGQIQMFGHENVVTHSITMKSLCKQGKLDEAEEYLRGLLSREKVVVSGHVLGVLVDALCKNGMFLHAGKLIHEFGEMGVVPMQEAYGIWIRDLVQAGKIDGAMEFFQTKKSLEGYIPEVFRYNFLMHRLLRENRLEEVSDLLMDMKESQIMPDKLTMNIALAFFCKAGFMDVALELYKMRSEFGFTPNSLVYNYLINNLCGDGSTDEAYRVLKNSMIQGCFPGKRTFSILADALCREGKLDKMKDLVLFALECKFMPAISTYEKFIKALCKARRVEDGYLIHGELSRLNKEMSECTYSYLIHGFKDVSRGDIAARLLIEMQEKGHKPSHKLFRAVICCLCQMESPEKHFLQLLEMQLSSFGPKQPVLNFFIDGAGHARRPELAREVYGMMKRIGSGPNLSSDILMLQSYLRSERIADALNFFEDVSKSRKVGRKLYNAMVVGLSKVGKAEFALALLNEERNEGLVPSLECYEELIKLYCSEKKYDEAIKLVNDMEKAGRRISSFIGNIFLLHSLQSTDLCKAWIRSRDVSNETPSSSMLGQLITAFSGLIRVTSNVEDLENVVQRCFPLDLYSYNLLLRKLSIDQMDEACQLFKRLCQIGYEPNRWTYDILVHGLFKHGRITEAKICAKEMLRQGHFPTERMKLLI*

Click here to download the sequence:
Link to NCBI Protein BLAST