Transcript Information: R_Transcript_104222.p1


Annotated TAIR IDAT5G13250.1
Annotated Gene NameRING finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4234486-4241615 | Forward length=387
E-Value3.6E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8081478391875
Replicate 21.6151000320229
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 11.2360652978177
Replicate 22.580101750906
Replicate 32.2689513275484
Condition 3: 24 Hour
Replicate 12.3178555374124
Replicate 22.173715419504
Replicate 32.4202750374934


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104222.p1 GENE.R_Transcript_104222~~R_Transcript_104222.p1 ORF type:complete len:416 (+),score=67.13,DUF3337|PF11816.4|1.1e-05,RAWUL|PF16207.1|1.6e-05 R_Transcript_104222:570-1817(+)
ATGACCATGGTTCCGGCACATGTTCAAAAACTGTCAAAGCCAACGCTTAGCCAGTTTGCTGCCTTCTACGGTGGTGGTGGTGGTGGTAGTTGCAGTTTCAACAACTCCGATCTCTTGATGAGCACACGGTCATTGCCGGATCATGGTTATGTTTATGGCCACTATGACTTACTAATTCCTAACACCAACAACAATAGTACAACAGCTACTACCATGACTCCTACTAACAGCCAAGCTCCTAGCAACAACAACAATGGATCTGACTTATTAGGGATAACTGGCCCTAACAATAACAATAATAATATTATTATTAATATGGCAGCTGATGAAGAGCATTCCAGAGCTTCTAACAGTTTTAACGAAGCCGCTTCTTCAAGTTCCAATAAGCTTGATATTTGTCCACAACCTCGCGATCAACACAATAGCCAAGCTCAACCTGGTGCTTGGCTTCAGCTAGGTCTTGGTGCTTCTCATGATCCTCCACCTCATCATCATGATGGAGAAGATTCACCAATATCATCCTCTCCTATGGGAGGGAGGAGTTTTAGCAGTACTAGTAATCTAAATCCAGGACTGATGCTTGAGCTCAACCTTGGAAGCGCTGCCGTTTCAAGCAGTGACTCGCTGCCAATAGCAGCCGCTAATTATGTTATGCCCGGATCAGGTGCACCTTTTCTCTCTCCACCTCTTCAAGTTCAAGCAGATCAGAATAATAATAATCAGATGGGCTTGGGTTGGGGATTCAATATCAGGCCCGGCCTTAGAATGACATCGTCGTTTATAGCGGGGTCGTCATCATCTCTAATGAGCCCTTTTTTAGGGAGGACCTTTCCAGCAGCCGCCGGTACTACTGCTGGATTACTACAAGGCGTGGGGCCCAGCTCCGATATCAGAATCATTGATCCTCCCCCAAGACGCCCTCATTCCGGCATTTGGTTTATGCTTCAAGCCTCCCAATATCAAGCTAGGGAACCTTATTTGCCTCAAGTCTCCAAGAGCTTTCTCCGAATCAAAGATGGGAGAATGACAGTTGGGTTAGTGAAGAAGTATGTGGCTAACAAGCTTGGATTGGATAGCGAATCCGAGGTAGAGATAAGATGTAGAGGGCAGCAACTGATACCAAACTTGACGTTGCAGCATGTAAGAGACAATATTTGGAGTTCAAGGGACGCTGTGACTTTGCTTCCTGACTCCTCAACCTCTGATCATGTCATGGTTCTTGATTATGGTAGGAGCCAAGTGCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104222.p1 GENE.R_Transcript_104222~~R_Transcript_104222.p1 ORF type:complete len:416 (+),score=67.13,DUF3337|PF11816.4|1.1e-05,RAWUL|PF16207.1|1.6e-05 R_Transcript_104222:570-1817(+)
MTMVPAHVQKLSKPTLSQFAAFYGGGGGGSCSFNNSDLLMSTRSLPDHGYVYGHYDLLIPNTNNNSTTATTMTPTNSQAPSNNNNGSDLLGITGPNNNNNNIIINMAADEEHSRASNSFNEAASSSSNKLDICPQPRDQHNSQAQPGAWLQLGLGASHDPPPHHHDGEDSPISSSPMGGRSFSSTSNLNPGLMLELNLGSAAVSSSDSLPIAAANYVMPGSGAPFLSPPLQVQADQNNNNQMGLGWGFNIRPGLRMTSSFIAGSSSSLMSPFLGRTFPAAAGTTAGLLQGVGPSSDIRIIDPPPRRPHSGIWFMLQASQYQAREPYLPQVSKSFLRIKDGRMTVGLVKKYVANKLGLDSESEVEIRCRGQQLIPNLTLQHVRDNIWSSRDAVTLLPDSSTSDHVMVLDYGRSQVL*

Click here to download the sequence:
Link to NCBI Protein BLAST