Transcript Information: R_Transcript_104327.p1


Annotated TAIR IDAT1G56140.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21001708-21007725 | Reverse length=1033
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.920485334102
Replicate 25.7281369143581
Replicate 37.9577871531285
Condition 2: 8 Hour
Replicate 17.4010268927885
Replicate 28.6239711124494
Replicate 39.6191067075652
Condition 3: 24 Hour
Replicate 16.8941010909494
Replicate 24.7833289644922
Replicate 36.2720409897684


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104327.p1 GENE.R_Transcript_104327~~R_Transcript_104327.p1 ORF type:complete len:1019 (+),score=153.66,Malectin|PF11721.4|6.2e-50,Malectin|PF11721.4|6.3e+03,Pkinase|PF00069.21|1.5e-47,Pkinase_Tyr|PF07714.13|1.6e-46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|0.52,LRR_8|PF13855.2|0.034,LRR_8|PF13855.2|3.4e-07,LRR_8|PF13855.2|0.82,LRR_8|PF13855.2|4e+02,LRR_4|PF12799.3|17,LRR_4|PF12799.3|0.79,LRR_4|PF12799.3|0.05,LRR_4|PF12799.3|0.79,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|2 R_Transcript_104327:134-3190(+)
ATGGATAGGGTGGTTTCACGGTGGCGGCTACCTCTACTGGCCGGGTGCGTGTTGTTGATGGTGATATGCCCTGTTGATGCTCAAAACAGGTCTCGAGCTGCCACTGCCCCTGCTGAAGCACAAGCATTAAACACAATATTACAACAATGGGGGAAGCCTGCAAACACTGATCAATGGAATACAACGGGAGATCCTTGCTCCGGGAAGGCTATCGACGATTCTGCTTCCATTGATGATCCTCAATACAACCCCTTCATCAAATGTGATTGTACTTATGATCGCAATACCACTTGCCACATTACTGCCCTGAAGGTTTATGCAATCGATGCAGTAGGTGTGATACCAGACAAGCTATGGACTTTGGTTTACCTCACTAACTTGAGGTTAGGACAGAACTACTTGTCCGGGCCTATATCTTCAGGCATTGGAAATTTGACACGCATGCAGTACCTGGACTTTGGCATAAATTTATTTTCTGGGCCACTTCCAAAAGAACTTGGTAAACTGACTGATCTGCGATCACTGGGTCTTGGAGCCAACAATTTCTCTGGCCCATTGCCATCAGAGATGGGAAGCCTAACAAAACTGGAAGGACTGTACATTGACAGTTCTGGATTGAGTGGTGTAATTCCTCCATCATTTGCTAATTTAAAGAGCTTGCAGACATTGTGGGCATCAGACACTGAACTTACTGGTTCAATACCCGAGTTCATAGGGAATTGGAGCCTGCTTCAAACCTTGAGGCTTGAAGGAAATGCATTGGCCGGACCACTACCAAAAGCACTTTCCACTTTGACCTCGTTGCAAGAGTTGAGGATCAGCGGCTTGTCAAATTCCAGCTTCACATTGGACTTCATGTCAAGTTTAACGTCCTTGAACATCTTGGTTTTGAAGAATAACAACATTACAGGTTCCATACCGAGCAGTATAGGAGAACTTCAAAGCTTAACTCAGCTGGACCTTAGCTTCAATAGCTTATCAGGACAAATTCCAAGCTCGCTGTTTAACCTGGGCTCCCTTTCGTACTTATTTCTTGGCGATAACAACCTTACTGGTAGCTTGCCCACTCAGAAAAGTTCCTCTCTGGTGAACATAGATGTGTCTTACAATCAATTATCTGGGAGCTTCCCGTCTTGGGTCAGCCAACGGAACCTAGAACTTAATATAGTTGCGAACAACTTTTCTTCAAGTGCAAATACCAGGAATTTGCCATCAGGATTGAACTGTGTGCAGAATGGATTCCCTTGCAACAGTGGGTTAGGACGCTACTCTGACTTTGCAGTCAAGTGTGGTGGTCCGCAAATCAAATCTTCCCAAGATGTTGTTTATGAAAAAGAAAATGAAGCTCTTGGACCTGCTACTTACTATGTGACTGACCCGAACAAATGGGCTGTCAGTAATGTCGGATTGTTTGCCTCAAACAACAATATGACATATACATATACCTCTCCACGCCAGTTCACCAGCCTAGACTCTGAGTTGTTCCAGACGACGAGACTGTCAGCTGGATCTCTACGATATTATGGTCTGGGGCTTCAGAATGGCAAATACAATGTACTCCTCCAATTTGCTGAGATACAAATAGAGAATGGCAAAACCTGGAAAAGTCTTGGAAGGCGTGTTTTTGACATTATTATTCAGGGAAATCGAGTGGAGAAAGATTTCAACATACGGAATGCAGCAGGCGGCCAGTCCTATAGACCTGTGCAGAGAAACTACACTGTTCAAGTGACAGCAAACCACCTCGAAATACATCTCTTCTGGGCTGGAAAGGGGACATGTTGCATACCTCTTCAAGGAACATATGGACCCTCTATATCAGCTCTCAGTGTCACTCCATTGTTTCAACCCAGGCCTATAAGCTCAACAGAAAACAAAAAGAAGACAGCTATTATTATCGGAACTGTTGTTCCTATTGTGACCATTGCGCTTCTCGCTTTGCTTGCTTGTTGGCTCATTCAAAGAAAGAAGAAAGCGTGTGACGCAGATGATGAGCTCCTAGGCATTGAAGCCAAGCCATACACCTTCACTTATGCTGAGCTGAGGTCAGCTACTGGTGATTTCAATGCTTCAGACAAACTTGGTGAAGGAGGTTTTGGACCTGTCTATAAGGGAACCCTGAATGACGGAAGACTAATTGCAGTAAAACAACTTTCCGTAGCATCTCACCAAGGAAAGAGTCAATTTATAGCAGAAATAGCTACTATATCTACAGTACAGCATCGGAACCTTGTGAAACTATATGGATGCTGCATTGAAGGACAAAAGCGTTTGCTTGTTTATGAGTACTTAGAGAACAAGAGTCTTGATCAAGCTTTGTTTGGAAACAATGAGTTAAAACTTGATAGCTGGAGTAAGCGCTTTGAGATTTGCTTAGGAGTTGCAAGGGGCCTTGCTTATCTTCATCAAGAATCCCGCCTTCGAATTGTGCACAGAGATGTTAAGGCCAGTAATATTTTGCTGGATTCCGATCTCAACCCCAAAATTTCTGATTTTGGTCTGGCTAAATTGTATGATGACAAAAAGACTCATATCAGCACTCGTGTAGCCGGAACAATTGGATACCTTGCACCAGAGTACGCCATGCGCGGCCACCTCACAGAGAAGGTTGATGTGTTTGGTTTTGGTGTTGTTGCTCTAGAGATTGTGAGTGGACGCTCAAACACTGACAACAACTTGGATAGAGAACAAATTTATCTTCTTGAATGGGCATGGCATCTCCACGAGAGCAATCAAGATGTAGAACTAGTAGACAAAAGACTTTCAGAATTCAACGAGGATGAGGTGAAACGAGTGATTGGCGTAGCTCTTTTGTGCACTCAGACTTCACCAGCACAGCGCCCAACCATGTCCCGAGCATTGGCAATGCTGATTGGTGACGTTGAAGTTGAAACCGCCACATCAAAGCCGACATACTTAGCTGACTGGACATTTGATGACTCGAGCTTTATGACCAGTGATACCTCCGAAGTATCAAGAACTGGTTATTCCATTCAAAGTACTACTACTACTACAACTTCTGCACATACACCTACCGATAATGTCACACTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104327.p1 GENE.R_Transcript_104327~~R_Transcript_104327.p1 ORF type:complete len:1019 (+),score=153.66,Malectin|PF11721.4|6.2e-50,Malectin|PF11721.4|6.3e+03,Pkinase|PF00069.21|1.5e-47,Pkinase_Tyr|PF07714.13|1.6e-46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|0.52,LRR_8|PF13855.2|0.034,LRR_8|PF13855.2|3.4e-07,LRR_8|PF13855.2|0.82,LRR_8|PF13855.2|4e+02,LRR_4|PF12799.3|17,LRR_4|PF12799.3|0.79,LRR_4|PF12799.3|0.05,LRR_4|PF12799.3|0.79,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|2 R_Transcript_104327:134-3190(+)
MDRVVSRWRLPLLAGCVLLMVICPVDAQNRSRAATAPAEAQALNTILQQWGKPANTDQWNTTGDPCSGKAIDDSASIDDPQYNPFIKCDCTYDRNTTCHITALKVYAIDAVGVIPDKLWTLVYLTNLRLGQNYLSGPISSGIGNLTRMQYLDFGINLFSGPLPKELGKLTDLRSLGLGANNFSGPLPSEMGSLTKLEGLYIDSSGLSGVIPPSFANLKSLQTLWASDTELTGSIPEFIGNWSLLQTLRLEGNALAGPLPKALSTLTSLQELRISGLSNSSFTLDFMSSLTSLNILVLKNNNITGSIPSSIGELQSLTQLDLSFNSLSGQIPSSLFNLGSLSYLFLGDNNLTGSLPTQKSSSLVNIDVSYNQLSGSFPSWVSQRNLELNIVANNFSSSANTRNLPSGLNCVQNGFPCNSGLGRYSDFAVKCGGPQIKSSQDVVYEKENEALGPATYYVTDPNKWAVSNVGLFASNNNMTYTYTSPRQFTSLDSELFQTTRLSAGSLRYYGLGLQNGKYNVLLQFAEIQIENGKTWKSLGRRVFDIIIQGNRVEKDFNIRNAAGGQSYRPVQRNYTVQVTANHLEIHLFWAGKGTCCIPLQGTYGPSISALSVTPLFQPRPISSTENKKKTAIIIGTVVPIVTIALLALLACWLIQRKKKACDADDELLGIEAKPYTFTYAELRSATGDFNASDKLGEGGFGPVYKGTLNDGRLIAVKQLSVASHQGKSQFIAEIATISTVQHRNLVKLYGCCIEGQKRLLVYEYLENKSLDQALFGNNELKLDSWSKRFEICLGVARGLAYLHQESRLRIVHRDVKASNILLDSDLNPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKVDVFGFGVVALEIVSGRSNTDNNLDREQIYLLEWAWHLHESNQDVELVDKRLSEFNEDEVKRVIGVALLCTQTSPAQRPTMSRALAMLIGDVEVETATSKPTYLADWTFDDSSFMTSDTSEVSRTGYSIQSTTTTTTSAHTPTDNVTLV*

Click here to download the sequence:
Link to NCBI Protein BLAST