Transcript Information: R_Transcript_104487.p2


Annotated TAIR IDAT5G22320.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7388175-7390426 | Reverse length=452
E-Value1.6E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6436315551642
Replicate 20.49754266389332
Replicate 31.6284410613378
Condition 2: 8 Hour
Replicate 11.5086077929582
Replicate 22.2254906097862
Replicate 30.51615954370769
Condition 3: 24 Hour
Replicate 10
Replicate 22.4041277463663
Replicate 30.9335987781141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104487.p2 GENE.R_Transcript_104487~~R_Transcript_104487.p2 ORF type:complete len:211 (+),score=35.47,LRR_4|PF12799.3|0.046,LRR_4|PF12799.3|0.00012,LRR_4|PF12799.3|0.051,LRR_4|PF12799.3|0.00056,LRR_4|PF12799.3|0.0045,LRR_8|PF13855.2|0.0056,LRR_8|PF13855.2|0.00084,LRR_8|PF13855.2|0.011,LRR_8|PF13855.2|0.00018,LRR_8|PF13855.2|0.0074 R_Transcript_104487:331-963(+)
ATGACCCAATTAAGCACAAAGGAGATCCTCAAGGACAAGAAGACTCATGATCCTAACTCCATTACCTCTCTTTCTCCCACTCACAAAGCTCTTACCAATGTCTCGTGTTTAAGCGCTTTCAAGAATCTCGAGAGACTCGACCTAACTTTCAACAATTTGACCTCTCTCCAGGGTTTGGAGTCATGCCTGAATTTGAAGTGGTTATCAGTGCAACAGAACAGCCTTCACAGCTTGAAAGGGATTGAAGGCCTCACTAATCTTACTGTGTTTAATGCTGGAAAAAATAAGCTAAGGTCAATGGAAGAAGTTAGGAACTTACTCAAGTTACGTGCATTGATATTAAATGACAATGAGATTGCATCAATTTCTGGGCTTGACCAACTTAAGGAATTGAATACTCTTGTTCTGTCTAGAAATCCAATCCGTAAGATGGGAAATTCGCTGGCCAAGTTGAAGTCAATTATGAAGATCTCTCTCTCCAACTGCCAATTAGAAGCTATTGACTCTTCAATCAAGGCTTGTACTGGACTAGAACAACTCCGCCTAGCTCATAATGAAATTAAGGTTGTATGTTCAACTTGCTCTGTTTGCTTGTTTGTGTTGAGGGATCGGCTAGCTTCATTAATTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104487.p2 GENE.R_Transcript_104487~~R_Transcript_104487.p2 ORF type:complete len:211 (+),score=35.47,LRR_4|PF12799.3|0.046,LRR_4|PF12799.3|0.00012,LRR_4|PF12799.3|0.051,LRR_4|PF12799.3|0.00056,LRR_4|PF12799.3|0.0045,LRR_8|PF13855.2|0.0056,LRR_8|PF13855.2|0.00084,LRR_8|PF13855.2|0.011,LRR_8|PF13855.2|0.00018,LRR_8|PF13855.2|0.0074 R_Transcript_104487:331-963(+)
MTQLSTKEILKDKKTHDPNSITSLSPTHKALTNVSCLSAFKNLERLDLTFNNLTSLQGLESCLNLKWLSVQQNSLHSLKGIEGLTNLTVFNAGKNKLRSMEEVRNLLKLRALILNDNEIASISGLDQLKELNTLVLSRNPIRKMGNSLAKLKSIMKISLSNCQLEAIDSSIKACTGLEQLRLAHNEIKVVCSTCSVCLFVLRDRLASLIS*

Click here to download the sequence:
Link to NCBI Protein BLAST