Transcript Information: R_Transcript_104490.p1


Annotated TAIR IDAT5G22320.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7388175-7390426 | Reverse length=452
E-Value1.5E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0489355715009
Replicate 23.5071771296712
Replicate 32.958999511307
Condition 2: 8 Hour
Replicate 13.5447243242114
Replicate 22.1414652988218
Replicate 33.2745667266177
Condition 3: 24 Hour
Replicate 14.7551805616403
Replicate 21.6701086910459
Replicate 34.0948044403104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104490.p1 GENE.R_Transcript_104490~~R_Transcript_104490.p1 ORF type:complete len:449 (+),score=127.05,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.00032,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.001,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|2.5e-06,LRR_4|PF12799.3|0.00019,LRR_8|PF13855.2|0.012,LRR_8|PF13855.2|0.015,LRR_8|PF13855.2|0.00052,LRR_8|PF13855.2|8e-07,LRR_8|PF13855.2|1.1e-06,LRR_9|PF14580.2|1.1e+02,LRR_9|PF14580.2|0.0016,LRR_9|PF14580.2|0.00076 R_Transcript_104490:331-1677(+)
ATGACCCAATTAAGCACAAAGGAGATCCTCAAGGACAAGAAGACTCATGATCCTAACTCCATTACCTCTCTTTCTCCCACTCACAAAGCTCTTACCAATGTCTCGTGTTTAAGCGCTTTCAAGAATCTCGAGAGACTCGACCTAACTTTCAACAATTTGACCTCTCTCCAGGGTTTGGAGTCATGCCTGAATTTGAAGTGGTTATCAGTGCAACAGAACAGCCTTCACAGCTTGAAAGGGATTGAAGGCCTCACTAATCTTACTGTGTTTAATGCTGGAAAAAATAAGCTAAGGTCAATGGAAGAAGTTAGGAACTTACTCAAGTTACGTGCATTGATATTAAATGACAATGAGATTGCATCAATTTCTGGGCTTGACCAACTTAAGGAATTGAATACTCTTGTTCTGTCTAGAAATCCAATCCGTAAGATGGGAAATTCGCTGGCCAAGTTGAAGTCAATTATGAAGATCTCTCTCTCCAACTGCCAATTAGAAGCTATTGACTCTTCAATCAAGGCTTGTACTGGACTAGAACAACTCCGCCTAGCTCATAATGAAATTAAGACTATTCCAGCTGAGCTTGCTAATAACAAGAAGCTTCAAATTCTTGATCTGGGGAACAACTTTATCTCAAAGTGGCCAGACCTGGAGGCACTTTCTTCCCTTTCTAGCCTGAAAAACCTCAATTTACTTGGAAATCCTATTGCTGAGAAGGCTAAGCTTGTGAAGAAGGTCAGTAAATTAGTTCCGGCTTTGCAGACATTCAATGCCAAAAGAATGGAGAAGTGGAGCAAGGTTCAGATTGATCAGAAAGTTGAGGATGCTGCTGTTAGTGCAGCAGATGACTCAGAACCTAAAACGAAGAAGAAAAAAGATAACAGGGATAAGTTGAAGGCTGAGGAACAGAATTCCAGAAAAACTGGAACAAGTCATGTTGCAGAAGAGGAGATTGATGAGACAGAGAATGACAGAAAGATTGAGAAGAAGAAGCTAAAGAAGACAAAGGAGAAACATGTAGAACAAGAAACACAGGTTCAAGAACCTGAAAAAACACCAGACAAAAGATCTAAAAGAAAGGCAGATAAAGCTGGGATTGATGTTATTGATGACAAAGAAACTCCTTTCGCAGAAATTTTGACATATGATAGCATTGAGAACACGAAATCAAATGGTGGCGAGAGAAGGGATGAACAAGCTGCTCGCAATGTTGATTCAATAAGCGCTCTGGTTACTTACCCAGGAAAGAAAAAGAAAGCTAAGAACAAAGGCGCTTCTGTTTCTGCGCTTCAGTTCCTGACTCCGGCAGCTGAAGTTGGGTTGGGTGGGCCTTCAGCTTGGGATGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104490.p1 GENE.R_Transcript_104490~~R_Transcript_104490.p1 ORF type:complete len:449 (+),score=127.05,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.00032,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.001,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|2.5e-06,LRR_4|PF12799.3|0.00019,LRR_8|PF13855.2|0.012,LRR_8|PF13855.2|0.015,LRR_8|PF13855.2|0.00052,LRR_8|PF13855.2|8e-07,LRR_8|PF13855.2|1.1e-06,LRR_9|PF14580.2|1.1e+02,LRR_9|PF14580.2|0.0016,LRR_9|PF14580.2|0.00076 R_Transcript_104490:331-1677(+)
MTQLSTKEILKDKKTHDPNSITSLSPTHKALTNVSCLSAFKNLERLDLTFNNLTSLQGLESCLNLKWLSVQQNSLHSLKGIEGLTNLTVFNAGKNKLRSMEEVRNLLKLRALILNDNEIASISGLDQLKELNTLVLSRNPIRKMGNSLAKLKSIMKISLSNCQLEAIDSSIKACTGLEQLRLAHNEIKTIPAELANNKKLQILDLGNNFISKWPDLEALSSLSSLKNLNLLGNPIAEKAKLVKKVSKLVPALQTFNAKRMEKWSKVQIDQKVEDAAVSAADDSEPKTKKKKDNRDKLKAEEQNSRKTGTSHVAEEEIDETENDRKIEKKKLKKTKEKHVEQETQVQEPEKTPDKRSKRKADKAGIDVIDDKETPFAEILTYDSIENTKSNGGERRDEQAARNVDSISALVTYPGKKKKAKNKGASVSALQFLTPAAEVGLGGPSAWDE*

Click here to download the sequence:
Link to NCBI Protein BLAST