Transcript Information: R_Transcript_104661.p5


Annotated TAIR IDAT1G03910.2
Annotated Gene NameEXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:996432-1000231 | Forward length=716
E-Value3.1E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2621148698288
Replicate 25.6746757881887
Replicate 35.57190914501
Condition 2: 8 Hour
Replicate 16.3972079591902
Replicate 29.0652223680482
Replicate 37.358761062319
Condition 3: 24 Hour
Replicate 14.5501960271125
Replicate 24.5700085989484
Replicate 36.7043419761668


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104661.p5 GENE.R_Transcript_104661~~R_Transcript_104661.p5 ORF type:complete len:111 (+),score=11.96,CactinC_cactus|PF09732.5|2.2e-48 R_Transcript_104661:842-1174(+)
ATGCGTGTTGGTTGTGAGTGGAACAAGTACAACCAGACACATTACGACCATGATAACCCACCTCCGAAGATGGTCCAAGGCTACAAATTTGACATCTTTTACCCTGATCTCCTTGTTGAATCCAAGGTTCCAGACTACTCCATTGAAAAAGATGGGGATAGCTCCACAACGTGCATTATAAGGTTTCACGCTGGCCCGTCTTATGAGGATATAGCTGTTCGCATAGTGAATGGAGAATGGGATTATCGTCAGAGAAAGGGCTTCAAATGCGAGTTTGAGAGTGGAATATTTCACCTGCATTTCACCTTCAAGAGGTTCCCCTATCGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104661.p5 GENE.R_Transcript_104661~~R_Transcript_104661.p5 ORF type:complete len:111 (+),score=11.96,CactinC_cactus|PF09732.5|2.2e-48 R_Transcript_104661:842-1174(+)
MRVGCEWNKYNQTHYDHDNPPPKMVQGYKFDIFYPDLLVESKVPDYSIEKDGDSSTTCIIRFHAGPSYEDIAVRIVNGEWDYRQRKGFKCEFESGIFHLHFTFKRFPYRR*

Click here to download the sequence:
Link to NCBI Protein BLAST