Transcript Information: R_Transcript_104665.p2


Annotated TAIR IDAT1G03910.2
Annotated Gene NameEXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:996432-1000231 | Forward length=716
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45348971316071
Replicate 20.26082360765588
Replicate 30.14227787326803
Condition 2: 8 Hour
Replicate 11.825033412217
Replicate 21.3888746485208
Replicate 31.0146863079719
Condition 3: 24 Hour
Replicate 11.9963310632786
Replicate 23.424729641394
Replicate 30.95163933421293


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104665.p2 GENE.R_Transcript_104665~~R_Transcript_104665.p2 ORF type:5prime_partial len:161 (+),score=30.36,Cactin_mid|PF10312.5|1.8e-09 R_Transcript_104665:3-485(+)
AAGAGGAGAACTGGAGAAGAGATGGGCTTCGTATGGTGGAAAAAAATAGAGAGGGATTTAGCGGAAGGTGTACCGCTGAAGGAGGTGGTCAAGGCGTCGGCAAAGAGGAAGAGAGCGGCGGTAGAGGTGGTGAAGGAGAAGAAGAAGCATAGGTCGGCGGCAAACAGAGAAGGAGAACGAATTAGGACTCATCAGCATGATGATCAAGATGATGAGATCAAGTTTTGTGTTGATCAGATTGCAATTAGGTCCAAGATTCGCCTGACTCAAGGTAGACCCAAACCCATCGATTTGCTTTTCTTTTATCACCACCTTCACATTCAAGATCATGATGCTCAGAATCATTCACATTGGAATCTCTTCGATTTCGATTTTGATTGTACTCAACTGCCTTACCAGGTTTTCAAGGGTGTCTTTCCCAAACCCAATAGTAGCAAAATATTGGGACGCGCTCTTGGTGCTTTGCAAGTCTCAATTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104665.p2 GENE.R_Transcript_104665~~R_Transcript_104665.p2 ORF type:5prime_partial len:161 (+),score=30.36,Cactin_mid|PF10312.5|1.8e-09 R_Transcript_104665:3-485(+)
KRRTGEEMGFVWWKKIERDLAEGVPLKEVVKASAKRKRAAVEVVKEKKKHRSAANREGERIRTHQHDDQDDEIKFCVDQIAIRSKIRLTQGRPKPIDLLFFYHHLHIQDHDAQNHSHWNLFDFDFDCTQLPYQVFKGVFPKPNSSKILGRALGALQVSIK*

Click here to download the sequence:
Link to NCBI Protein BLAST