Transcript Information: R_Transcript_10476.p1


Annotated TAIR IDAT5G65380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26123241-26126352 | Reverse length=486
E-Value2E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0220134030991
Replicate 22.780966942556
Replicate 33.1098551041134
Condition 2: 8 Hour
Replicate 12.6756077591361
Replicate 22.3693649633044
Replicate 33.7865942684913
Condition 3: 24 Hour
Replicate 10.76019229230808
Replicate 20.65727592720263
Replicate 32.246751143357


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10476.p1 GENE.R_Transcript_10476~~R_Transcript_10476.p1 ORF type:complete len:302 (+),score=35.80,MatE|PF01554.14|8.3e-27,MatE|PF01554.14|5.9e+03 R_Transcript_10476:108-1013(+)
ATGTCTATGACTATGAGAGAAGAACAAGAACAGGAGCTGTTGATCCATATCAATCCCAGAAATGGAGAGAGAAAAATGGACACAATAATGGTATTGGTAAGAGAAACATGGGAAGAGCTGAAGAAAATATGGAAGATAGCAGGACCTTCCATATTTTGTAGGCTGGCCATGTTTTCTTTGACGATAATAACGCAATCATTGGCCGGTCATTTCAGTGACCTTGACCTCGCCGCTTTTTCTATTTCCACCACTTTTCTCATCGCCATCTCTTTCGGCTTCTTGATAGGAATGGCAAGTGCTTTGGAGACCTTATGTGGACAAGCCTATGGTGCAAAGCAACATAACATGTTAGGCATCTACATGCAGCGTTCATGGGTTGTTCTCTTCTGTTGTGCTGTTTTATTGCTGCCCATGTTCATATTTGCAGCACCTCTACTAAAATTCATGGGCCAATCTGCAGAAGTGGCAGAGCGTACTGGCTTGGTAGCGAAATGGTTGATTCCTATGCACCTAAGCTTTGTGTTTCAGTTTTCATTGCAAAGGTTCTTGCAAAGCCAACTGAAAACGGCAGTGATTGCTTGGTCTGCTGCTGTGGCTCTGGCAGTCCATGTCTTCATAAGCTGGGCGTTTGTATACAAACTTGGTGTTGGTATAGTCGGGGCTGCTCTTACTCTTGACTTCTCCTGGTGGGTATCTGTTTCCATACTGTATGGATACGTTCTCTGTGGTGGGTGTCCTGCTACGTGGAATGGTATCTCCTGGCAAGCCTTTTCTGGACTATGGGACTTCTTCAAGCTAGCAGTGGCATCAGCTGTCATGTTCTCGTATGTATTTTCTTCACTCAAGAATGTGTTCTCTCTAAATATTGGCCTATCTAGTGGCTTCATAGTGTGGTTTGTTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10476.p1 GENE.R_Transcript_10476~~R_Transcript_10476.p1 ORF type:complete len:302 (+),score=35.80,MatE|PF01554.14|8.3e-27,MatE|PF01554.14|5.9e+03 R_Transcript_10476:108-1013(+)
MSMTMREEQEQELLIHINPRNGERKMDTIMVLVRETWEELKKIWKIAGPSIFCRLAMFSLTIITQSLAGHFSDLDLAAFSISTTFLIAISFGFLIGMASALETLCGQAYGAKQHNMLGIYMQRSWVVLFCCAVLLLPMFIFAAPLLKFMGQSAEVAERTGLVAKWLIPMHLSFVFQFSLQRFLQSQLKTAVIAWSAAVALAVHVFISWAFVYKLGVGIVGAALTLDFSWWVSVSILYGYVLCGGCPATWNGISWQAFSGLWDFFKLAVASAVMFSYVFSSLKNVFSLNIGLSSGFIVWFVV*

Click here to download the sequence:
Link to NCBI Protein BLAST