Transcript Information: R_Transcript_10480.p1


Annotated TAIR IDAT5G65380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26123241-26126352 | Reverse length=486
E-Value4.1E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0836713418629
Replicate 22.396837947066
Replicate 31.987342531173
Condition 2: 8 Hour
Replicate 13.4660356774639
Replicate 22.1441941491548
Replicate 33.8126670709489
Condition 3: 24 Hour
Replicate 14.2980369695702
Replicate 23.021268341175
Replicate 33.1982034245695


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10480.p1 GENE.R_Transcript_10480~~R_Transcript_10480.p1 ORF type:complete len:219 (+),score=29.20,MatE|PF01554.14|1.6e-18,MatE|PF01554.14|30 R_Transcript_10480:251-907(+)
ATGGCAAGTGCTTTGGAGACCTTATGTGGACAAGCCTATGGTGCAAAGCAACATAACATGTTAGGCATCTACATGCAGCGTTCATGGGTTGTTCTCTTCTGTTGTGCTGTTTTATTGCTGCCCATGTTCATATTTGCAGCACCTCTACTAAAATTCATGGGCCAATCTGCAGAAGTGGCAGAGCGTACTGGCTTGGTAGCGAAATGGTTGATTCCTATGCACCTAAGCTTTGTGTTTCAGTTTTCATTGCAAAGGTTCTTGCAAAGCCAACTGAAAACGGCAGTGATTGCTTGGTCTGCTGCTGTGGCTCTGGCAGTCCATGTCTTCATAAGCTGGGCGTTTGTATACAAACTTGGTGTTGGTATAGTCGGGGCTGCTCTTACTCTTGACTTCTCCTGGTGGGTATCTGTTTCCATACTGTATGGATACGTTCTCTGTGGTGGGTGTCCTGCTACGTGGAATGGTATCTCCTGGCAAGCCTTTTCTGGACTATGGGACTTCTTCAAGCTAGCAGTGGCATCAGCTGTCATGTTCTCGTTGGAGAACTTTTATTACAGGGTCCTGGTGATAGTTTCTGGAGACACAGGGAACTCAAAGGTTTCAGTTGACGGTCTCTCTATATGGTCGGAGCTTGTCTTCACTATGTATTATTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10480.p1 GENE.R_Transcript_10480~~R_Transcript_10480.p1 ORF type:complete len:219 (+),score=29.20,MatE|PF01554.14|1.6e-18,MatE|PF01554.14|30 R_Transcript_10480:251-907(+)
MASALETLCGQAYGAKQHNMLGIYMQRSWVVLFCCAVLLLPMFIFAAPLLKFMGQSAEVAERTGLVAKWLIPMHLSFVFQFSLQRFLQSQLKTAVIAWSAAVALAVHVFISWAFVYKLGVGIVGAALTLDFSWWVSVSILYGYVLCGGCPATWNGISWQAFSGLWDFFKLAVASAVMFSLENFYYRVLVIVSGDTGNSKVSVDGLSIWSELVFTMYYC*

Click here to download the sequence:
Link to NCBI Protein BLAST