Transcript Information: R_Transcript_104834.p1


Annotated TAIR IDAT5G57930.2
Annotated Gene NameArabidopsis thaliana protein of unknown function (DUF794)
Annotated Gene Symbol(s)APO2
Annotation TypeOrtholog
Chromosome Positionchr5:23454690-23456354 | Forward length=443
E-Value4E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9172847399566
Replicate 23.3937985586689
Replicate 33.505125795963
Condition 2: 8 Hour
Replicate 15.4354398482031
Replicate 25.3974542375276
Replicate 35.9462172721957
Condition 3: 24 Hour
Replicate 14.5025009864678
Replicate 23.8976966142831
Replicate 34.8586930662725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104834.p1 GENE.R_Transcript_104834~~R_Transcript_104834.p1 ORF type:complete len:464 (+),score=94.49,APO_RNA-bind|PF05634.7|3.6e-95,APO_RNA-bind|PF05634.7|5e-29 R_Transcript_104834:349-1740(+)
ATGCCATCGTTGATTCTCCAGCCAACGCAGGTGACTCCATCCATACGAGGAGCTTCATCTCATCTACAAGCATGTAGTATGCGTGCAGGCTATTGTAACAAACACTTATTACCTTGTCAACATACTTCAAGTGTTTCCTATGTTATAAAATCAGAGTTTGTGAGGCTCAATGTGCTCTCTGATCTTGCATTTCTTCACTCGTTTAAGGTGGATGATAAAGCATTCAAACTGCCCTTGAAATATAGGATCAAGTCGCAAACCTCAGCACATAATTCTGCTTCAGTAACAAGGAATGACTATCCCCAAAATGCTGACTTACCAAAATACTACTCTAAGAAAGAGAGGAAGCCTTTTCCAGTACCAATTGTAGATCTGAGGCGAGCAGCTAGAGAAAGATTAAAGAATAGTAGAGGCCAGCCTAGGAGACCTGTACCACCGCCAAAGAATGGATTGCTGGTCAAGCGCCTTGTACCAGTTGCTTATGATGTTCTGAATTCAAGGGTTTTATTGATAAACAATCTTAAGAAACTCTTAAGAGTTGTGACTGTTCATGCATGCAAGTGTTGCAATGAAATCCACGTCGGGCCTGTTGGGCACCCATTCAAGTCTTGTAAAGGGCCAGGTGCATCAATTCGGTATGGCCTCCATGATTGGACTAATGCAGTGGTGGAGGACATTTTGGTGCCTGTGGAGGCATACCACCTGTATGATCGACTTGGGAAACGTATATCTCATGAGGAAAGATTTTCGATTCCTCGCATTCCTGCAGTAGATGAACTTTGCATACAAGCTGGAGTTTATATTCCTGAATATCCCACAAAGAGGCGAAGAAAGGCCATCATCCGTATCAGTAAAAATGAGTTTATTGATGCTGATGAAAGTGAGCTGCCAGACCCTGAACCAGAAAGTCCCAGAGTTCCAATATTAACAGAAATACCAGAATCAGAAATTGTACCCCCATCTAGTGCAGAGGAAACAATCTTGCTTGCTGAAGAAACTCTCCAAGCATGGGAAAGGCTGAGGCAAGGAGCAAATAAATTGATGAAAATGTATCCAGTTAGGGTTTGTGGGTATTGTCCTGAAGTGCATGTGGGTCCCTCAGGTCACAAGGCGCAGAACTGTGGAGCCCGCAAGCACCAGCAACGGAATGGACAACATGGATGGCAGAGGGCAGTTCTTGATGATTTAATACCACCTAGATATGTCTGGCATGTTCCTGATGTTAATGGTCCTCCATTGAAGAGGGAGCTTCGAAGCTTTTATGGCCAAGCACCTGCTGTGGTTGAATTGTGTGTGCAAGCTGGGGCAGCAGTTCCAGAACAATATAAGCCCACTATGAGATTGGATATAGGAATTCCGACTAGCATTGAAGAAGCTGAAATGGTGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104834.p1 GENE.R_Transcript_104834~~R_Transcript_104834.p1 ORF type:complete len:464 (+),score=94.49,APO_RNA-bind|PF05634.7|3.6e-95,APO_RNA-bind|PF05634.7|5e-29 R_Transcript_104834:349-1740(+)
MPSLILQPTQVTPSIRGASSHLQACSMRAGYCNKHLLPCQHTSSVSYVIKSEFVRLNVLSDLAFLHSFKVDDKAFKLPLKYRIKSQTSAHNSASVTRNDYPQNADLPKYYSKKERKPFPVPIVDLRRAARERLKNSRGQPRRPVPPPKNGLLVKRLVPVAYDVLNSRVLLINNLKKLLRVVTVHACKCCNEIHVGPVGHPFKSCKGPGASIRYGLHDWTNAVVEDILVPVEAYHLYDRLGKRISHEERFSIPRIPAVDELCIQAGVYIPEYPTKRRRKAIIRISKNEFIDADESELPDPEPESPRVPILTEIPESEIVPPSSAEETILLAEETLQAWERLRQGANKLMKMYPVRVCGYCPEVHVGPSGHKAQNCGARKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLKRELRSFYGQAPAVVELCVQAGAAVPEQYKPTMRLDIGIPTSIEEAEMVV*

Click here to download the sequence:
Link to NCBI Protein BLAST