Transcript Information: R_Transcript_104956.p1


Annotated TAIR IDAT1G68070.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25515412-25516767 | Reverse length=343
E-Value3E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.855722165039
Replicate 210.001392311864
Replicate 312.428892323464
Condition 2: 8 Hour
Replicate 111.045674092921
Replicate 211.709483866362
Replicate 317.235440999169
Condition 3: 24 Hour
Replicate 111.732380980719
Replicate 213.775839937963
Replicate 314.085462953082


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104956.p1 GENE.R_Transcript_104956~~R_Transcript_104956.p1 ORF type:complete len:317 (+),score=31.51,zf-RING_2|PF13639.2|1.4e+03,zf-RING_2|PF13639.2|2.5e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|3.7e+02,zf-RING_11|PF17123.1|2.9e-07,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|1.8e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.9e+03,zf-C3HC4_2|PF13923.2|6.1e-06 R_Transcript_104956:273-1223(+)
ATGGAGGATTTTACCTCTAGTAGTAGTACCCTTAATGACGACAGACCCACAGCAAACAACTATATAAGAGACTATCTAAGGACCACCTGCTCTGTTCCCCTCCCCTTTTTCAGCCACTCGGAGCTCCGACCCGGATATGACTCTGATGATGGGTCGGGCTCAGATCATCATGCATATTCCAAGCCATTTGTGGTCCTTGATGTCATTTGGAATCTGGGTTTTGTCTTTGTGTCTATTTTTGTGTTGTTATGTACTTTACAAGAGAAACCCACTAGCCCTTTGAGGGTTTGGATTTCTGGGTATGCTTTGCAGTGCCTTTTGCATGTGGGTTTTGTTTATTTTGAGTATCACCGCAGGGTTCATGGCTCTGGTTCTTTTGAAGGTCACAGTCATAGCAGCATTGTTAAGAGATTGGAATCAGCAAATACGATAGCATCATCATTTTGGTGGGTTTTTGGATTTTACTGGATTGTAACGGGTGGCCAATCCCTTTTGCAGGATTCACCACGTCTTTATTGGTTAGCAGTTGTTTTCCTGGCACTTGATGTATTCTTCATGATATTCTGCATAGGGATGGCCTGTATCATTTGCCTAGCTTTCTTTTGTTGTATCCCTATTGTAGCAATTGCTTATGCCATGACAATCCGAGAAGGAGCATCTGAAGATGAGATCAGACTTCTTCCTAAATACAGGTTTCACCAGTCTTGTGTACCAAGGATATCTGCCTCTACTGAATTTGGAAGCAGGAAATCCACTAACGAACCTGCTTTTCTATTCCAAGCTTCTGAGTGTTGCATTTGCTTGACTCAGTATCTAGAGGGAGCTGAATTATGCAGCCTTCCCTGCAACCACCATTTTCATTACGGATGTATCAGCAGATGGTTGCGGATAAATGCAACTTGTCCGCTATGTAAATTTAATATCAGGGCCAAGGGTGACACTTTGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104956.p1 GENE.R_Transcript_104956~~R_Transcript_104956.p1 ORF type:complete len:317 (+),score=31.51,zf-RING_2|PF13639.2|1.4e+03,zf-RING_2|PF13639.2|2.5e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|3.7e+02,zf-RING_11|PF17123.1|2.9e-07,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|1.8e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.9e+03,zf-C3HC4_2|PF13923.2|6.1e-06 R_Transcript_104956:273-1223(+)
MEDFTSSSSTLNDDRPTANNYIRDYLRTTCSVPLPFFSHSELRPGYDSDDGSGSDHHAYSKPFVVLDVIWNLGFVFVSIFVLLCTLQEKPTSPLRVWISGYALQCLLHVGFVYFEYHRRVHGSGSFEGHSHSSIVKRLESANTIASSFWWVFGFYWIVTGGQSLLQDSPRLYWLAVVFLALDVFFMIFCIGMACIICLAFFCCIPIVAIAYAMTIREGASEDEIRLLPKYRFHQSCVPRISASTEFGSRKSTNEPAFLFQASECCICLTQYLEGAELCSLPCNHHFHYGCISRWLRINATCPLCKFNIRAKGDTLV*

Click here to download the sequence:
Link to NCBI Protein BLAST