Transcript Information: R_Transcript_104958.p1


Annotated TAIR IDAT1G68070.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25515412-25516767 | Reverse length=343
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8693266674184
Replicate 23.041866844764
Replicate 34.7756096048516
Condition 2: 8 Hour
Replicate 14.4991695309426
Replicate 23.7926584041587
Replicate 32.5014587074031
Condition 3: 24 Hour
Replicate 14.7051336367733
Replicate 23.1952848569388
Replicate 34.0217690590765


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_104958.p1 GENE.R_Transcript_104958~~R_Transcript_104958.p1 ORF type:complete len:283 (+),score=25.28,zf-RING_2|PF13639.2|5.8e+03,zf-RING_2|PF13639.2|1.3e+03,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|3.2e+02,zf-RING_11|PF17123.1|2.5e-07,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|1.8e-06,zf-C3HC4_2|PF13923.2|9.4e+03,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.1e+03,zf-C3HC4_2|PF13923.2|5.2e-06 R_Transcript_104958:275-1123(+)
ATGGAGGATTTTACATCTAGTAGTTGTAGCCTTAATGACAACAGACCCACAACAAACAACCATATAAGAGACTATCTAAGGACCACCTGCCCTGTTCCCCTCCCTTTTTTAAGCCCTTGCATAGACTGGAACCACTCGGAGCTCCGACCCGGATATGACTCTGATGATGGGTCGGGCTCAGATCATCATGCATATTCCAAGCCATTTGTGGTCCTTGATGTCATTTGGAATCTGGGTTTTGTCTTTGTGTCTATTTTTGTGTTGTTATGTACTTTACAAGAGAAACCCACTAGCCCTTTGAGGGTTTGGATTTCTGGGTATGCTTTGCAGTGCCTTTTGCATGTGGGTTTTGTTTATTTTGAGTATCACCGCAGGGTTCATGGCTCTGGTTCTTTTGAAGGTCACAGTCATAGCAGGTTAGCAGTTGTTTTCCTGGCACTTGATGTATTCTTCATGATATTCTGCATAGGGATGGCCTGTATCATTTGCCTAGCTTTCTTTTGTTGTATCCCTATTGTAGCAATTGCTTATGCCATGACAATCCGAGAAGGAGCATCTGAAGATGAGATCAGACTTCTTCCTAAATACAGGTTTCACCAGTCTTGTGTACCAAGGATATCTGCCTCTACTGAATTTGGAAGCAGGAAATCCACTAACGAACCTGCTTTTCTATTCCAAGCTTCTGAGTGTTGCATTTGCTTGACTCAGTATCTAGAGGGAGCTGAATTATGCAGCCTTCCCTGCAACCACCATTTTCATTACGGATGTATCAGCAGATGGTTGCGGATAAATGCAACTTGTCCGCTATGTAAATTTAATATCAGGGCCAAGGGTGACACTTTGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_104958.p1 GENE.R_Transcript_104958~~R_Transcript_104958.p1 ORF type:complete len:283 (+),score=25.28,zf-RING_2|PF13639.2|5.8e+03,zf-RING_2|PF13639.2|1.3e+03,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|3.2e+02,zf-RING_11|PF17123.1|2.5e-07,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|1.8e-06,zf-C3HC4_2|PF13923.2|9.4e+03,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.1e+03,zf-C3HC4_2|PF13923.2|5.2e-06 R_Transcript_104958:275-1123(+)
MEDFTSSSCSLNDNRPTTNNHIRDYLRTTCPVPLPFLSPCIDWNHSELRPGYDSDDGSGSDHHAYSKPFVVLDVIWNLGFVFVSIFVLLCTLQEKPTSPLRVWISGYALQCLLHVGFVYFEYHRRVHGSGSFEGHSHSRLAVVFLALDVFFMIFCIGMACIICLAFFCCIPIVAIAYAMTIREGASEDEIRLLPKYRFHQSCVPRISASTEFGSRKSTNEPAFLFQASECCICLTQYLEGAELCSLPCNHHFHYGCISRWLRINATCPLCKFNIRAKGDTLV*

Click here to download the sequence:
Link to NCBI Protein BLAST