Transcript Information: R_Transcript_10505.p1


Annotated TAIR IDAT5G06600.1
Annotated Gene Nameubiquitin-specific protease 12
Annotated Gene Symbol(s)UBP12
Annotation TypeOrtholog
Chromosome Positionchr5:2019545-2027834 | Reverse length=1116
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.484427535972
Replicate 227.370177328389
Replicate 338.430142806402
Condition 2: 8 Hour
Replicate 136.335274591358
Replicate 241.886723306078
Replicate 358.538944250748
Condition 3: 24 Hour
Replicate 149.338787497396
Replicate 242.003452869287
Replicate 348.211578091585


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10505.p1 GENE.R_Transcript_10505~~R_Transcript_10505.p1 ORF type:complete len:1120 (+),score=251.17,USP7_ICP0_bdg|PF12436.4|1.3e-77,USP7_ICP0_bdg|PF12436.4|3.4e+02,USP7_C2|PF14533.2|67,USP7_C2|PF14533.2|83,USP7_C2|PF14533.2|3e-61,UCH|PF00443.25|5.2e-48,UCH|PF00443.25|6e+02,UCH_1|PF13423.2|3.6e-22,MATH|PF00917.22|1.9e-20,MATH|PF00917.22|3.2e+03 R_Transcript_10505:270-3629(+)
ATGACTGTCATGACTCCTGCCCCAATCGACCAAGAAGATGATGAGATGCTCGTGCCGCATTCTGATATAACAGACAATCACCAGCCTATGGAAGTCGTTGCTCAAGCGGAAACTCCGAATACAGTGGAGAATCAACCTGCTGAAGATCCTCCTGCGTCGAGGTTTACTTGGAAGATTGAGAATTTCTCGCGGTTGAATGCCAAGAAGCACTACTCTGATGTCTTTGTCGTTGGCGGTTATAAATGGCGGATACTTATTTTCCCTAAAGGGAACAATGTCGACTATTTGTCTATGTATCTTGATGTTGCTGATTCTGCTAGTTTGCCTTATGGGTGGAGTAGGTTCGCACAGTTCAGCTTGGGTGTTGTCAATCAAATTCATAACAAGTACTCCGTGAAAAAAGATACACAGCACCAGTTCAATGCTAGGGAAAGTGATTGGGGCTTTACATCTTTTATGCCCTTAAGCGAGTTATATGATCCTAGTAGAGGATATCTTGTTAATGATACTGTTGTTGTTGAAGCTGAGGTTTCTGTTCGTAAGATTGTGGACTATTGGTCCTATGACTCAAAAAAAGAGACTGGATATGTTGGACTTAAGAATCAAGGAGCAACATGCTACATGAATTCTCTACTTCAAACTCTTTTCCACATTCCTTATTTCAGAAAGGCCGTGTACCATATGCCTACAACTGAGAATGATATGCCATCTGCGAGCATTCCTCTGGCTCTGCAGAGTTTATTCTATAAGCTTCAGTATAGTGACAGCAGTGTTGCGACAAAAGAGTTGACCAAATCTTTTGGATGGGATACATATGATTCCTTCATGCAACATGATGCGCAGGAGCTTAATAGAGTTCTTTGTGAAAAGCTTGAAGATAAAATGAAGGGCACTGTTGTTGAGGGTACTATTCAACAGTTGTTTGAAGGGCATCATATGAACTATATTGAGTGCATGAATGTGGATTACAAATCCACAAGGAAGGAGTCTTATTATGATCTTCAGCTTGACGTTAAGGGTTGCCGGGATGTATATGCTTCTTTTGACAAGTATGTGGAAGTTGAAAGATTGGAGGGTGATAACAAGTATCATGCTGAGCAATATGGCTTGCAGGATGCGAGAAAGGGTGTTTTGTTCATTGATTTTCCTCCAGTTCTTCAACTGCAGCTCAAACGATTTGAGTATGATTTTATGCGGGACACTATGGTAAAGATCAATGATCGTTATGAATTCCCCCTTCAACTTGATCTTGATCGTGAAAATGGGAAGTATTTGTCTCCTGAGGCTGATAGAAGTGTCCGCAACCTTTATACACTCCATAGTGTTTTGGTTCATAGTGGCGGGGTGCATGGTGGACACTATTATGCTTTTATACGGCCAACTCTCTCTGATCAGTGGTACAAATTTGATGACGAGCGGGTTACAAAAGAAGATATGAAGAGGGCCTTGGAGGAGCAGTATGGTGGAGAAGAGGAGCTACCACAAACCAATCCTGGTTTCAACAATACCCCATTCAAATTCACAAAATATTCGAATGCCTATATGCTTGTGTATATACGTGAAACTGATAAAGAGAAGATTATGTGTAATGTGGACGAGAAGGATATCGCGGATCATCTGAGGGAACGTTTGAAGAGAGAACAAGAAGAGAAGGAGCATAAGAAAAAGGAGAAGGCTGAGGCACACCTTTACACTATCATAAAGGTTGCACATGATAAAGACCTGACTGAGCAGATTGGGAAGGATATCTATTTTGATCTTGTAGATCATGACAAAGTGAAATCTTTTCGAATTCAGAAGCAAATGCCCTTTAACCTGTTCAAGGAGGAGGTTGCTAAAGAATTTGGGATACCACTACAGTTTCAGCGTTTTTGGCTATGGGCGAAGCGTCAAAATCATACATATAGACCAAATCGACCACTGACACCAATGGAGGAAAACCAATCTGTTGGACAGCTGAGGGAAGTCTCTAACAAGGTTCATAATGCAGAGCTCAAGTTGTTCTTGGAAGTGGAGCTTGACGCTGATTTACGACCTATTTCTCCTCCAGAAAAGACAAAGGATGATATTTTATTATTCTTCAAGCATTATGATCCTGAGAAAGAAGAGCTGCGGTATGTGGGAAGGCTATTTGTAAAGGGTAATGGTAAACCAGGAGAGATTTTGGACAAGTTAAAGGAAATGGCTGGCTATGCGGCTGAGGATGAAATTGAATTATATGAGGAAATAAAGTTTGAGCCAACAGTTATGTGTGAACATATTGACCGAAAACTCTCATTTCGGACTAGTCAGCTTGAAGATGGAGATATAGTTTGTTTCCAGAAAGCTATTCCATCTGAAAGTGCAGAAAGACACCGTTATCCTGATGTCCCCTCGTTCTTGGATTATGTGCACAATCGCCAGGTTGTTCACTTCAGATTGCTGGAAAGACCTAAGGAAGATGATTTTTGCTTGGAGCTGTCAAGACTTCATACTTATGACGATGTTGTGGAAAGAGTTGCTCGCCAACTTGGCTTGGATGATCCATCCAAAATTAGGCTTACTTCTCACAACTGCTATTCTCAGCAGCCAAAGCCCCAGCCCATTAAGTATCGGGGCGTTGATCATCTGTCAGACATGCTCATCCACTACAATCAGACTTCTGACATATTGTACTATGAAGTTCTGGACATACCATTGCCTGAATTGCAAGGTTTGAAAACTTTGAAAGTTGCTTTCCATCATGCCACAAAAGATGAAGTAACCATTCATACTATTCGACTGCCGAAACAGAGTACTGTAGGGGATGTTCTGAATGATTTGAAGACAAAGGTTGAGTTGTCACATCCTGATGCTGAGCTTAGGTTACTTGAAGTTTTCTACCACAAAATCTATAAGATCTTCCCCCCTAATGAAAAGATCGAGAACATAAATGATCAATACTGGACATTACGAGCTGAAGAGATTCCCGAAGAAGAGAAGAACCTGGGTCCTCAAGATCGATTAATTCATGTGTACCATTTTACAAAGGAGACAGCTCAGAACCAAATGCAAATACAAAACTTTGGTGAACCCTTTTTCTTGGTGATCCGTGAAGGAGAAAGCTTGGCTGAGGTCAAAGTGAGAATACAAAAGAAATTGCAAGTGCCAGACGAGGAGTTTGCCAAGTGGAAGTTTGCATTTCTCTCATTAGGTCGTCCAGAGTACCTCCAGGACACAGACATCGTGTCTAGTCGTTTCCAGAGAAGAGACGTTTATGGTGCTTGGGAACAGTATCTTGGATTGGAGCATGCTGACACAGCTCCTAAAAGAACGTACACGGCGAATCAGGTAAAAGTCTCAGTGCTGTCTTCTTTTGTTGGATACATCTTTCCTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10505.p1 GENE.R_Transcript_10505~~R_Transcript_10505.p1 ORF type:complete len:1120 (+),score=251.17,USP7_ICP0_bdg|PF12436.4|1.3e-77,USP7_ICP0_bdg|PF12436.4|3.4e+02,USP7_C2|PF14533.2|67,USP7_C2|PF14533.2|83,USP7_C2|PF14533.2|3e-61,UCH|PF00443.25|5.2e-48,UCH|PF00443.25|6e+02,UCH_1|PF13423.2|3.6e-22,MATH|PF00917.22|1.9e-20,MATH|PF00917.22|3.2e+03 R_Transcript_10505:270-3629(+)
MTVMTPAPIDQEDDEMLVPHSDITDNHQPMEVVAQAETPNTVENQPAEDPPASRFTWKIENFSRLNAKKHYSDVFVVGGYKWRILIFPKGNNVDYLSMYLDVADSASLPYGWSRFAQFSLGVVNQIHNKYSVKKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVVEAEVSVRKIVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSASIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDAQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECMNVDYKSTRKESYYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDMKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRETDKEKIMCNVDEKDIADHLRERLKREQEEKEHKKKEKAEAHLYTIIKVAHDKDLTEQIGKDIYFDLVDHDKVKSFRIQKQMPFNLFKEEVAKEFGIPLQFQRFWLWAKRQNHTYRPNRPLTPMEENQSVGQLREVSNKVHNAELKLFLEVELDADLRPISPPEKTKDDILLFFKHYDPEKEELRYVGRLFVKGNGKPGEILDKLKEMAGYAAEDEIELYEEIKFEPTVMCEHIDRKLSFRTSQLEDGDIVCFQKAIPSESAERHRYPDVPSFLDYVHNRQVVHFRLLERPKEDDFCLELSRLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKIYKIFPPNEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKETAQNQMQIQNFGEPFFLVIREGESLAEVKVRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRRDVYGAWEQYLGLEHADTAPKRTYTANQVKVSVLSSFVGYIFPI*

Click here to download the sequence:
Link to NCBI Protein BLAST