Transcript Information: R_Transcript_105061.p1


Annotated TAIR IDAT1G58100.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21512680-21513885 | Reverse length=401
E-Value3.1E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2750464903056
Replicate 26.113481266798
Replicate 36.997762320543
Condition 2: 8 Hour
Replicate 13.9738396573095
Replicate 25.2833587166524
Replicate 34.7653393036815
Condition 3: 24 Hour
Replicate 15.0956469503019
Replicate 23.6846494566597
Replicate 33.9178469009959


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105061.p1 GENE.R_Transcript_105061~~R_Transcript_105061.p1 ORF type:complete len:419 (-),score=72.81,TCP|PF03634.9|9.9e-37,TCP|PF03634.9|2.6e+02 R_Transcript_105061:264-1520(-)
ATGGAAGTCAGAGATTCAAACTCTTCTTCTCACCACCAGCACAAACAGATCATCCCTCTTGATGGCTCCACCGCCGCTGCCGCGGCCACCAGCAGCAAGTCTCAGCCGCAGAAGCGGTCGACGAAAGACCGGCATACAAAGGTGGATGGGAGAGGGAGAAGGATACGTATGCCAGCAGCATGTGCAGCTAGAGTATTTCAGTTAACAAGGGAATTAGGACACAAGTCTGATGGTGAGACTATTGAGTGGCTTTTACATGAAGCTGAACCTGCTATTATTGCTGCTACTGGTACTGGTACTATCCCTGCTAACTTCTCTACTCTTAATGTTTCTCTTCGTAGCTCTGCAGCTTCTTCTAAGTCTGTAGCTTCTCATACCTCTTTTCATTCTTCTTCTCCTGGTGCTGCTGTTGCTGCCCAATTTGCCTTTGCCCAACACCACCCCTCTAATTCCGCCCCTGATTCTATTTTCTCTCACCTCCAGCAACACCACCACCACCCGCATCAGGGTGTGTTCGGCCCTGCTGCCGGATTTCAATCCGGTGGCGGGGTTCCTGAAAATCATGATCAGTCCGAGTGTCCGGGAATGCCGTCCTCGAATAAGAAGCCGAGGACGGCATCCGGAGGCCCTCTACCAGGCGCAGGCATGCCGGTATGGGCGGTGCCTGCGCCTGGTCAGGTCGTAGGAGGACCGGCCAATGGAGCTGGCGCTATTGGAAGCACGCTCTGGATGCCACCCTTGAGCGCCAGCTCCATTGACCCCGCGGCCACATCTGAAGCTGGACCTATTGCGCAGGAGCAACAACAGGCTCAGCCTCAGATGTGGCCTTTTGGTGGTAGCGTACCTACCACCGCCAGCGGCACAACAACTGCAGGTTCATTGCAGTTTATGCCACGGTTTAACATGAATACGACTCCAGGTATTGGGGGTGGTACAGCTATAGATTTTCAAGAGGATGGGAATAACAGCAATAACAGATCGCTTCAATTGGGATCAATGCTGTCACAACAGCTTGGGATGAGGATGCCGGAACCTAATTTGGGAATGTTGGGTGCCTTGAATTCAGTTCATAATGATAATAATAATAATAGTAAAGCTTATAGATCAAGGGACCAAAAGCATGATACTACTGGCTGTACATTGGAGCATCACCAACACCAAAGCCAAAGGCAAACACCTGATATTGATGATGACGATGATGATAGCCGGGAAGATAACCACAATGAAGGCGAAAATGATCTAAATAGCTCGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105061.p1 GENE.R_Transcript_105061~~R_Transcript_105061.p1 ORF type:complete len:419 (-),score=72.81,TCP|PF03634.9|9.9e-37,TCP|PF03634.9|2.6e+02 R_Transcript_105061:264-1520(-)
MEVRDSNSSSHHQHKQIIPLDGSTAAAAATSSKSQPQKRSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLHEAEPAIIAATGTGTIPANFSTLNVSLRSSAASSKSVASHTSFHSSSPGAAVAAQFAFAQHHPSNSAPDSIFSHLQQHHHHPHQGVFGPAAGFQSGGGVPENHDQSECPGMPSSNKKPRTASGGPLPGAGMPVWAVPAPGQVVGGPANGAGAIGSTLWMPPLSASSIDPAATSEAGPIAQEQQQAQPQMWPFGGSVPTTASGTTTAGSLQFMPRFNMNTTPGIGGGTAIDFQEDGNNSNNRSLQLGSMLSQQLGMRMPEPNLGMLGALNSVHNDNNNNSKAYRSRDQKHDTTGCTLEHHQHQSQRQTPDIDDDDDDSREDNHNEGENDLNSSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST