Transcript Information: R_Transcript_105173.p1


Annotated TAIR IDAT1G70940.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN3, ATPIN3
Annotation TypeOrtholog
Chromosome Positionchr1:26743170-26745871 | Forward length=640
E-Value4.3E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.391415350075
Replicate 25.1000477351891
Replicate 35.2027921354037
Condition 2: 8 Hour
Replicate 14.0166087610623
Replicate 24.6555779227705
Replicate 35.4397571259835
Condition 3: 24 Hour
Replicate 17.0249441674678
Replicate 24.1049220017163
Replicate 38.8379375391888


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105173.p1 GENE.R_Transcript_105173~~R_Transcript_105173.p1 ORF type:3prime_partial len:317 (+),score=21.24,Mem_trans|PF03547.14|9.1e-109 R_Transcript_105173:232-1179(+)
ATGATTACCTGGCACGACCTGTACACGGTGCTAGCGGCAGTGGTGCCGCTCTATGTGGCAATGATATTAGCCTACGGATCGGTCCGTTGGTGGAAGATCTTCTCACCGGACCAATGCTCCGGCATAAACCGATTCGTGGCAATATTCGCTGTTCCTCTGCTTTCCTTCCACTTCATATCCACCAACAATCCTTATGAAATGAACCTCCGGTTCATTGCTGCTGACACTCTCCAAAAAATCATTATGCTTACTCTTCTTGCTATTTGGACTAACTTGTCTAAGTCGGGTAGTCTAGAATGGATGATTACCATCTTCTCTCTTTCTACTCTTCCCAACACACTTGTGATGGGAATTCCTCTACTTATTGCTATGTATGGTGAATATTCTGGTAGCTTGATGGTTCAAGTTGTGGTGTTACAGTGTATTATTTGGTATACACTTTTATTGTTTCTATTTGAGTATAGGGGTGCTAAGATTTTGATTATGGAGCAGTTTCCTGAGACTGCTGCCTCGATTGTTTCCTTCAAGGTTGATTCTGATGTTGTCTCTTTGGATGGCCGGGATTATTTGGAGACTGATGCTGAGATTGGGAGGGATGGGAAGTTGCACGTCACGGTTCGGAAATCGAATGCCTCGAGAAGGTCCTTGTCCGGTATGACTCCAAGGCCGTCGAACCTCACCGGGGCCGAGATCTATAGCTTGAGCTCGTCCCGGAATCCGACCCCTAGAGGCTCGAATTTTAACACTTCCGATTTTTATTCCATGATGGGTTACCAAGATGGGTTCGGTGGGAGGCTATCGAATTTCGGCCCTGCTGAGCTGTACTCAGTTCAGTCCTCTCGTGGACCCACTCCCCGACCCTCCAACTTCGAGGCAGATAACCCGAGTTCTTCCCCTAAGTTTGGGTTCTATCCCAGTGCCACCGGTCTGGGTTTGGGGGCTGGGTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105173.p1 GENE.R_Transcript_105173~~R_Transcript_105173.p1 ORF type:3prime_partial len:317 (+),score=21.24,Mem_trans|PF03547.14|9.1e-109 R_Transcript_105173:232-1179(+)
MITWHDLYTVLAAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYEMNLRFIAADTLQKIIMLTLLAIWTNLSKSGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETAASIVSFKVDSDVVSLDGRDYLETDAEIGRDGKLHVTVRKSNASRRSLSGMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNTSDFYSMMGYQDGFGGRLSNFGPAELYSVQSSRGPTPRPSNFEADNPSSSPKFGFYPSATGLGLGAGS

Click here to download the sequence:
Link to NCBI Protein BLAST