Transcript Information: R_Transcript_105241.p1


Annotated TAIR IDAT5G18590.1
Annotated Gene NameGalactose oxidase/kelch repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6178516-6182186 | Reverse length=708
E-Value8.9E-302
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7425045700239
Replicate 24.9246940583171
Replicate 36.2736149315305
Condition 2: 8 Hour
Replicate 14.3675629891856
Replicate 24.3968026092219
Replicate 35.8380882472874
Condition 3: 24 Hour
Replicate 15.739451806926
Replicate 25.2040498505857
Replicate 35.7485965961374


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105241.p1 GENE.R_Transcript_105241~~R_Transcript_105241.p1 ORF type:complete len:712 (+),score=148.77,Kelch_3|PF13415.2|5.3e+03,Kelch_3|PF13415.2|0.99,Kelch_3|PF13415.2|0.00039,Kelch_3|PF13415.2|5.8e-11,Kelch_3|PF13415.2|6.9e-05,Kelch_3|PF13415.2|32,Kelch_3|PF13415.2|48,Kelch_4|PF13418.2|0.01,Kelch_4|PF13418.2|0.89,Kelch_4|PF13418.2|4.4e-08,Kelch_4|PF13418.2|1.2e-07,Kelch_4|PF13418.2|1.9,Kelch_4|PF13418.2|2.8e+02,Kelch_5|PF13854.2|0.00027,Kelch_5|PF13854.2|0.73,Kelch_5|PF13854.2|0.0013,Kelch_5|PF13854.2|7.1e-06,Kelch_5|PF13854.2|0.0015,Kelch_5|PF13854.2|3.2e+02,Kelch_1|PF01344.21|0.00039,Kelch_1|PF01344.21|0.0017,Kelch_1|PF01344.21|0.0062,Kelch_1|PF01344.21|0.0022,Kelch_1|PF01344.21|23,Kelch_1|PF01344.21|26,Kelch_1|PF01344.21|5e+03,Kelch_6|PF13964.2|1.1,Kelch_6|PF13964.2|0.0038,Kelch_6|PF13964.2|0.047,Kelch_6|PF13964.2|1.8e-07,Kelch_6|PF13964.2|87,Kelch_6|PF13964.2|65,Kelch_2|PF07646.11|0.54,Kelch_2|PF07646.11|0.15,Kelch_2|PF07646.11|5.9e-05,Kelch_2|PF07646.11|0.0099,Kelch_2|PF07646.11|1.6e+03 R_Transcript_105241:213-2348(+)
ATGAAGATGTTTGGATTTTCTCGAAGACGAACCAAGCTTGGAAGGTTGAAAGTGCACCTGTCAGACCCAGCTCAGGGGACTAAAAGTCCTCTAAGACCTCCCAGATGGGTTAGCAATTCCAATGGGGAAAATGTCATGGTTTCTGCTGATCATTCAGATGAGCCTGACTGCCAGTGCTCATCGGCCTCACAAGATATCAACACTTGCACATCAGGGAGCTCTGAGAGCTGGATGGCGTTGTCAATTGCTGGAGACAGACCTATACCTCGCTTTAATCATGCAGCAGCTATGGTATCAAACAAGATGGTGGTGGTTGGTGGGGAATGCTCAAATGGGATGCTGGATGATGTGCAGGTGCTTAGTTTTGATCAATTCTCATGGACAACAGCTTCTTCCAAGATCTACTTGTCACCAACTAGCCTGCCTCTGAAGATTCCATCTTGCAAGGGCCACAGCCTGGTTGCTTGTGGTAAGAAAGCTCTTCTGATTGGAGGGAAAACTGATCCTTGCAGCGCTAAGGTTTCAGTTTGGGCATTCGATACGGAAACAGAATGTTGGTCGCTCATGGAAGCAAAAGGAGATGTGCCGGTTGCTCGCAGTGGCCATTCGGTGGTCAAATCAAATTCTGTGTTAATACTTTTTGGAGGCGAAGATTCTAAAAGAAGGAAGTTAAATGACCTACATATGTTTGATTTGAAGTCCATGACATGGTTGCCTCTTCAGTGCACGGGAACCGGACCATCTCCACGATCGAATCATGCTGCAGCTCTATATGATGATAAATCACTTTACATCTTTGGAGGTTCTTCGAAGACGAAGACTTTGAATGACTTGTATTCACTAGATTTTGAAACGATGATGTGGACAAGAATTAAGATTCGAGGCTTCCATCCTTCACCAAGAGCTGGTTGTTGTGGTGTTCTCTGTGGAACTAAATGGTACATTACTGGAGGTGGAAGCCGCAAAAAAAGACATTTGGAGACTCTAGTTTTTGATATCCTAAAAGTTGAATGGTCAGTTGCAACGATATCTCCTCCATCATCAATCACTACAAATAAAGGATTTAGTCTTGTGTTGCTGCAACAAAAGGAAAAGGACTTTCTTGTTGCATTTGGAGGATCCAGAAAGGAGCCATCAAATCAGGTCGAAGTGCTGACATTGGAGAAGAACGGAAGCTCTTCTGGGAGAAGATCACTCCCAAATAAAATTCCAGCACAACTGCTACGTCATAATCACACTCCATCAAATGATTTTACAACTCAGCTAAATACTGCTTCATCGTGTCCCGTAGATTCCCTTAGACAAAATTTAGCATCCATTATAGAAGAACATGGTTCTTCTAGGAGATCTTTGTCGCAATCTGTTCTTACTGATACAACTGCTTCTGGAAGTGTCTCTCTCAGGAAGCAGTTTAACAATGAGGAGGAGCTGACCCATAAACTGATGAAAAATTGTGATGAGAACATTCACTTTCAGTTCATGGAAGAAAGAAAACCACCTGAAACAGCATATTCAACAGAAACATCAGGCAGATTTATCATGGAAGGACTACCATCTTTATCTGATTCTGGAAACATTAATGTGCCCAATTCTGTCGTGGAGAAATTTTCCCTTGAAAATGAAGAGATTATTTTCCCGGAAAGTGATGGAACCTCTGGAGGTTTTTCTGCTCCTTCAAGTGTATATCAATTATATGAAACAAGAATGGCTGCCTTAATCAGGAAGAATGGGATGCTTGAGGGACAATTAGCGGCTGCTGTGGCAAGTCGTGAAGCTGCTGAGACAAACATTTCTTCTGTTGTAAAGAGCAAGCAGGAGACAGAGAAAAAGCTTGACGATACACTGAAGGAATTGGAATTGTTAAAGGAGAAGCTGGCAAGTATGGAGCTTGCTCAGGAAGAAGCTAACAACTTGTCAAGTATTGTTCATTCAGACAATGTAAGGCTTGAACATGACGTAGCTTTCCTGAAAGCAGTCTTAGATGACACCCAAAAGGAGCTGCATTCTACCAGGGGAGTGCTAGCTAATGAAAGAGCAAGAGGCTTCCAGCTACAGGTTGAAGTTTTCCACCTGAAACAAAGATTGCAGTCATTGGAGAATCGTACGCCGACGCCAAGAAAGCCATTCCAAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105241.p1 GENE.R_Transcript_105241~~R_Transcript_105241.p1 ORF type:complete len:712 (+),score=148.77,Kelch_3|PF13415.2|5.3e+03,Kelch_3|PF13415.2|0.99,Kelch_3|PF13415.2|0.00039,Kelch_3|PF13415.2|5.8e-11,Kelch_3|PF13415.2|6.9e-05,Kelch_3|PF13415.2|32,Kelch_3|PF13415.2|48,Kelch_4|PF13418.2|0.01,Kelch_4|PF13418.2|0.89,Kelch_4|PF13418.2|4.4e-08,Kelch_4|PF13418.2|1.2e-07,Kelch_4|PF13418.2|1.9,Kelch_4|PF13418.2|2.8e+02,Kelch_5|PF13854.2|0.00027,Kelch_5|PF13854.2|0.73,Kelch_5|PF13854.2|0.0013,Kelch_5|PF13854.2|7.1e-06,Kelch_5|PF13854.2|0.0015,Kelch_5|PF13854.2|3.2e+02,Kelch_1|PF01344.21|0.00039,Kelch_1|PF01344.21|0.0017,Kelch_1|PF01344.21|0.0062,Kelch_1|PF01344.21|0.0022,Kelch_1|PF01344.21|23,Kelch_1|PF01344.21|26,Kelch_1|PF01344.21|5e+03,Kelch_6|PF13964.2|1.1,Kelch_6|PF13964.2|0.0038,Kelch_6|PF13964.2|0.047,Kelch_6|PF13964.2|1.8e-07,Kelch_6|PF13964.2|87,Kelch_6|PF13964.2|65,Kelch_2|PF07646.11|0.54,Kelch_2|PF07646.11|0.15,Kelch_2|PF07646.11|5.9e-05,Kelch_2|PF07646.11|0.0099,Kelch_2|PF07646.11|1.6e+03 R_Transcript_105241:213-2348(+)
MKMFGFSRRRTKLGRLKVHLSDPAQGTKSPLRPPRWVSNSNGENVMVSADHSDEPDCQCSSASQDINTCTSGSSESWMALSIAGDRPIPRFNHAAAMVSNKMVVVGGECSNGMLDDVQVLSFDQFSWTTASSKIYLSPTSLPLKIPSCKGHSLVACGKKALLIGGKTDPCSAKVSVWAFDTETECWSLMEAKGDVPVARSGHSVVKSNSVLILFGGEDSKRRKLNDLHMFDLKSMTWLPLQCTGTGPSPRSNHAAALYDDKSLYIFGGSSKTKTLNDLYSLDFETMMWTRIKIRGFHPSPRAGCCGVLCGTKWYITGGGSRKKRHLETLVFDILKVEWSVATISPPSSITTNKGFSLVLLQQKEKDFLVAFGGSRKEPSNQVEVLTLEKNGSSSGRRSLPNKIPAQLLRHNHTPSNDFTTQLNTASSCPVDSLRQNLASIIEEHGSSRRSLSQSVLTDTTASGSVSLRKQFNNEEELTHKLMKNCDENIHFQFMEERKPPETAYSTETSGRFIMEGLPSLSDSGNINVPNSVVEKFSLENEEIIFPESDGTSGGFSAPSSVYQLYETRMAALIRKNGMLEGQLAAAVASREAAETNISSVVKSKQETEKKLDDTLKELELLKEKLASMELAQEEANNLSSIVHSDNVRLEHDVAFLKAVLDDTQKELHSTRGVLANERARGFQLQVEVFHLKQRLQSLENRTPTPRKPFQV*

Click here to download the sequence:
Link to NCBI Protein BLAST