Transcript Information: R_Transcript_105320.p1


Annotated TAIR IDAT5G28500.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in 49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10477810-10479114 | Forward length=434
E-Value1.3E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4521904414359
Replicate 21.8257652535911
Replicate 32.2408765039714
Condition 2: 8 Hour
Replicate 14.0987208716041
Replicate 22.6249730857044
Replicate 32.8805816854092
Condition 3: 24 Hour
Replicate 13.9427538499753
Replicate 21.9657948141602
Replicate 32.9024999693494


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105320.p1 GENE.R_Transcript_105320~~R_Transcript_105320.p1 ORF type:complete len:460 (+),score=120.93 R_Transcript_105320:124-1503(+)
ATGCTCTCCCTTTCATCCCCCAAACCCCTTTCCCTTTCCCTTTCTTCTTCCACCACAAACACCTTCCTTTCACCTATCTCAATCCCTTCACTTTCCTTGTTCACTCCCACAAAAACTCCCACTTCAATCATATCCTCCTCTTCTTTGAGCTCAAACCCCCCACCTCTAGTCCCAAACCTCATCATCCCAAAAAACTCTTCACCAACCCCAACTCCCCAAAACCTATACCAGCCATACCGGCCTCCTCAATCCCCTCCCCCTCAGAAATACAAGAACCTTGACACTGCCTCCATCATTGAAGTCCTTTCCAACAGACTAGGCCTCTGGTTTGAATATGCTCCTCTGATATCAACCCTCTTTCGCGACGGTTTTACTCCTCCTTCTATTGAGGAACTCACTGGTATCTCCGGGGTTGAACAAAACCGCCTTGTTGTTGGTGCCCAAGTCAGGGAATCCATTGCTGAGTCCCCTGGCATTGATCCTCAGGTTCTTGCATATTTTGACAGTGGTGGCTCTGAGATTCTCTATGAACTTAGGCTCCTTAATGCCTCTCAAAGAGCTGCTGCTGCTACTTATGTTGTGAATAATAAGCTTGATGGTGAAAAGGCTAGGGACATTGCTAGAGCTATTAAGGATTTCCCTTCAAGGCAAATGGTTCCTTGTTGGTCTAAGTTTGATTATACCGAGCCTGGGGATTGTTGGGCTTTTACCTTTTTCAGGCAATCAAAGGACCTTCCGAAGTCATCGGAGAAGTGGAACGCAGCCCTAAAGATGGCGTTGGAGGTGGCAGAGACGGAGGAGGCGAAGGCGGCTGTAAAGGAGGAGATGGAGGGACTAAAGGATAAAGAAGAGGAGGTCATGAAGGATGACGGGGTGAGAGTTCCTATAGTGAGGCTACAAATGGGGGAGGTGGCGGAGGCGACATCGGTGGTGGTGCTGCCGGTTTGCAAGGCGGAGGAGAGGGAGGACGGGTTGGCGAGGGCGCCTTTCGAGTGTAGGAGTGTAGGGGAGTTTGGTGTGGTGGTTGCAGAGAAAGGGTGGAATAGCTGGGTGGTACTGCCTAAATGGCTTCCTATTGCAGGTATGGGACCAGGGGGTGTTGCAGTGGCCTTTCCTAATGACAGGGTGCTGCCATGGAGGGTGAACAGTGGCCACAAGGAGCCGCTCTTGGTGGTGGCTGACCGGACAAGGACGGAGGTTCGAGCTAATGAGGGGTTTTACTTGGTGGTCGATGGTGGTAGGGAAGGAAAGTTGAAGGTAGGGAGGGGTTCAGCATTGAAAGAAAAGGGGGTGAATCAAAGTTTAGGGACTGTGATTGTTGTGGTTAGGCCACCAAGAGATGAAGCAGATGGTCAATTGAGTGATGAAGATTGGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105320.p1 GENE.R_Transcript_105320~~R_Transcript_105320.p1 ORF type:complete len:460 (+),score=120.93 R_Transcript_105320:124-1503(+)
MLSLSSPKPLSLSLSSSTTNTFLSPISIPSLSLFTPTKTPTSIISSSSLSSNPPPLVPNLIIPKNSSPTPTPQNLYQPYRPPQSPPPQKYKNLDTASIIEVLSNRLGLWFEYAPLISTLFRDGFTPPSIEELTGISGVEQNRLVVGAQVRESIAESPGIDPQVLAYFDSGGSEILYELRLLNASQRAAAATYVVNNKLDGEKARDIARAIKDFPSRQMVPCWSKFDYTEPGDCWAFTFFRQSKDLPKSSEKWNAALKMALEVAETEEAKAAVKEEMEGLKDKEEEVMKDDGVRVPIVRLQMGEVAEATSVVVLPVCKAEEREDGLARAPFECRSVGEFGVVVAEKGWNSWVVLPKWLPIAGMGPGGVAVAFPNDRVLPWRVNSGHKEPLLVVADRTRTEVRANEGFYLVVDGGREGKLKVGRGSALKEKGVNQSLGTVIVVVRPPRDEADGQLSDEDWD*

Click here to download the sequence:
Link to NCBI Protein BLAST