Transcript Information: R_Transcript_105325.p1


Annotated TAIR IDAT1G73590.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN1, ATPIN1
Annotation TypeHomolog
Chromosome Positionchr1:27659772-27662876 | Forward length=622
E-Value2E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4767544675655
Replicate 21.8330103538038
Replicate 33.2117912502542
Condition 2: 8 Hour
Replicate 13.6923129682354
Replicate 24.6733059932637
Replicate 34.2257717846403
Condition 3: 24 Hour
Replicate 14.4943855419315
Replicate 23.3841402530515
Replicate 35.5008781620509


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105325.p1 GENE.R_Transcript_105325~~R_Transcript_105325.p1 ORF type:3prime_partial len:378 (+),score=96.43,Mem_trans|PF03547.14|6.9e-106 R_Transcript_105325:422-1552(+)
ATGATTACTGGGACTGACTTGTACAATGTTCTAACAAAAGTGGTACCACTATATGTGGCAATGATCTTAGCATATGGGTCAGTAAAATGGTGGAAAATATTCAGCCCAGATCAATGTTCTGGGATCAACAGATTTGTAGCTCTTTTTGCAGTCCCATTACTCTCATTCACCTTCATTGCAGCCAACAATCCTTATGCAATGAACTTCAAGTTCATAGCAGCTGATACTCTCCAAAAAGTGATTGTTCTTGTGGTCCTTTCTATATGGTCTAGGATCAGTTCTAGAGGGTCACTTGACTGGTCTATAACCCTTTTTTCACTCTCAACTTTACCCAACACTCTTGTTATGGGTATCCCTCTTTTAAAGGGTATGTATGGGGAGTATTCTGGTGGTTTAATGGTACAAATTGTGGTCCTTCAATGTATCATTTGGTACACTCTTATGTTGTTTTTGTTTGAGTATAGGGGTGCTAAACTCTTGATTTCTGAACAATTTCCTGATACTGCTGGTTCTATTATATCATTTAAGGTTGATTCTGATATCATTTCACTTGATGGGAAAGAGCCCTTGGAAACTCAAGCTGAATTAGGTGATGATGGGAAACTTCATGTGACTGTTAGGAAATCTACTAGTTCTAGATCAGAAGCTTTTTCTAGACCTTCTCATGGGATTTCTATGACTCCTAGGCCTTCTAATTTGACCAATGCTGAGATTTATTCATTACAATCTTCAAGGAATCAAACCCCTAGAGGGTCTAGTTTTAATCACACTGATTTTTACTCCTTTGTGAATGGGAAAGGTGGTTTTAGTAGTGTTAGTCCCAGGACTTCAAATTATGGGAACAACATGGGTTTTGATGAGGAGAGTAATATGGGTGTTCCTGCATTTGGTGGGCCTAGAGGTGGTGGTGCTGGTGGGCCCCAACATGCTGCTAGTGGGTACCCTGCCCCACCTTCAGCTGGGATTTTCTCACCTGCTGCTGGGCCCACTGCTGCTAAGAAGAAAGGTGGTGGTGGTGATGGTGGTGGAAAGGATCTTCATATGTTTGTATGGAGTTCAAGTGCTTCTCCTGTTTCTGAAGCTGGTTTGCATGTCTTTAGAGGTGGTGGTGCTACTGCTAATACTAATCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105325.p1 GENE.R_Transcript_105325~~R_Transcript_105325.p1 ORF type:3prime_partial len:378 (+),score=96.43,Mem_trans|PF03547.14|6.9e-106 R_Transcript_105325:422-1552(+)
MITGTDLYNVLTKVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFTFIAANNPYAMNFKFIAADTLQKVIVLVVLSIWSRISSRGSLDWSITLFSLSTLPNTLVMGIPLLKGMYGEYSGGLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIISFKVDSDIISLDGKEPLETQAELGDDGKLHVTVRKSTSSRSEAFSRPSHGISMTPRPSNLTNAEIYSLQSSRNQTPRGSSFNHTDFYSFVNGKGGFSSVSPRTSNYGNNMGFDEESNMGVPAFGGPRGGGAGGPQHAASGYPAPPSAGIFSPAAGPTAAKKKGGGGDGGGKDLHMFVWSSSASPVSEAGLHVFRGGGATANTNP

Click here to download the sequence:
Link to NCBI Protein BLAST