Transcript Information: R_Transcript_105439.p1


Annotated TAIR IDAT1G53460.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19954558-19956509 | Reverse length=314
E-Value9E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1408100596699
Replicate 21.0662183805151
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 10.28694372985053
Replicate 20.43673597346066
Replicate 32.3398560565343
Condition 3: 24 Hour
Replicate 10.98646827931541
Replicate 21.9815271659503
Replicate 31.9664734679634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105439.p1 GENE.R_Transcript_105439~~R_Transcript_105439.p1 ORF type:complete len:256 (+),score=60.94 R_Transcript_105439:313-1080(+)
ATGCTCACCATCAAAGCCATGCTTTCCCATTCTTCTTTCCGTAGTCTAAAACCTCCATTGAACCCTCACAAATTCTCTAGAATCCCAAACCATGCACAAACCCAGAGACCCATTTCTGTTTCAGCACAATTAGAAACCCCAACAAAAGTCAAGAAAAAGAATAAAAACAGACCATTGGATGCTCTTTTCAAGGAAGCACTGGGGCTATGTGAAAGGACTGAGATTTTAGGAACTCAGAGTGAGAATAAGAGTGATGATGAGGATGGAGAGCTAAAGAGCAAGTTATGGGATTTGGAAATGGAGTTAAGGCAATTGAAGGTAGAAACATCAGAAGAAAAGGAGAGAAAATTTGGTGGGTCTCAGTCTAAGTTTAAGCATAAAAGCTTGCTTGCCCATATTACCAATACAGGTGGGGAGAAAGAAAATTCATTGGGAAAGAGAGAAGATGTAGTCTTGAAAGAGATGTCACCTGATATGCAAGTGTTGTTAAGGCATTTATATGATAGAGGGTACTTCAAAAATGTTAATTTTTTGCCTGGTAATGCATTTGATGTTAGTTATTTTGACAATGCCTATGCCCGTGATTTTTTAAAGTGTACTGTGGAGAGGTTTGGGGAAGATAATCAAGAAATTACCAAGCTTATTTTCCCAACAAAGCTGGAAGGCTATTCAAACACTTCAGATATTATTTTTGAGAATCCTTCAGTATCAGCAATCAGCCAATCAAGCAAGTCAGAAGCTCGGGATCAAACACCCCAGGTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105439.p1 GENE.R_Transcript_105439~~R_Transcript_105439.p1 ORF type:complete len:256 (+),score=60.94 R_Transcript_105439:313-1080(+)
MLTIKAMLSHSSFRSLKPPLNPHKFSRIPNHAQTQRPISVSAQLETPTKVKKKNKNRPLDALFKEALGLCERTEILGTQSENKSDDEDGELKSKLWDLEMELRQLKVETSEEKERKFGGSQSKFKHKSLLAHITNTGGEKENSLGKREDVVLKEMSPDMQVLLRHLYDRGYFKNVNFLPGNAFDVSYFDNAYARDFLKCTVERFGEDNQEITKLIFPTKLEGYSNTSDIIFENPSVSAISQSSKSEARDQTPQVV*

Click here to download the sequence:
Link to NCBI Protein BLAST