Transcript Information: R_Transcript_10544.p1


Annotated TAIR IDAT2G20760.1
Annotated Gene NameClathrin light chain protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8943279-8945108 | Reverse length=338
E-Value2.4E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1190.4153298388
Replicate 2222.83988931255
Replicate 3210.93575889146
Condition 2: 8 Hour
Replicate 1193.74163231672
Replicate 2201.24793657067
Replicate 3205.80965153569
Condition 3: 24 Hour
Replicate 1251.98100803096
Replicate 2252.86920691765
Replicate 3205.78409965445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10544.p1 GENE.R_Transcript_10544~~R_Transcript_10544.p1 ORF type:5prime_partial len:331 (+),score=88.12,Clathrin_lg_ch|PF01086.13|7.5e-10 R_Transcript_10544:1-993(+)
AAGATGTCGTCTTCATTCGATGCATTCGAAACTGAACACCAGCAGAACTCCGATCGTCCCTTTGACGACGGATACTTAGGCTACGATCCTCGCCTCCCTTCTCAGCGCTTCGATTCGTCCAATTTCGGGGATTCCTTTTCCGGTGAGATCTCCGGCGCCGGCGATGACGAGGTCACCGTCGAGCCTGCTCATGAGGAGGATAGTTTCGGATCCGGAAACCCTAGCGGCGACTTCTCTCATCAGTCGCCATTCGGCGAGGCGGTTCTTGTGTCGAACGGAAATGGAAAACCCTACGATTTGGGAGCTGATGATGATGGAATTTTCACCTCTGATGGTCCTGTTCTGCCTGAGCCTAGCCAGATGCAAGAGGAAGGGTTTGCTCTTAGGGAGTGGAGGAGAGAAAATGCCATTCGTCTGGAAGGGGAGAAAAAAGAAAAGGAAATGAGGATGCAGATTATTGAAGAAGCTGAGGAGTATAAGCATGCCTTTTTCGAGAAAAGAAAGCTTAACATCGAGACCAGCAAAACTAACAATAGGGACAAGGAAAAGATATACCTAACCAACCAAGAGAAGTTCCATAAAGAAGCAGATAAACAGTACTGGAAAGCAATAGCAGAACTCATACCTCATGAGGTTCCCAACATCGAGAAGAGGAGAGGAAAGAAAGAACAAGAGAAGAAGCCGTCGATCACTGTCGTTCAAGGTCCGAAGCCTGGGAAACCCACAGATATGTCAAGGATGCGACAGATACTAGTGAAGCTGAAGCATTCACCTCCACCCCACATGACTCCGCCTAAACCTGAGCCGGCCAAGGATGGAAAAGATGGAAAGGATGGGAAAGATGCAAAGACAGGAAAAGATGCTGCTAAGAGCCCTCCTGGCGCTGCTAAAGGTGCAACCCCTAACAGTCCTGAAAAGCCCGAGAAGGAAGCTACTACAACAGCCACAGCTGAACAGCCAACTACAGAAGCCGAGCCAGTAGCAAATGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10544.p1 GENE.R_Transcript_10544~~R_Transcript_10544.p1 ORF type:5prime_partial len:331 (+),score=88.12,Clathrin_lg_ch|PF01086.13|7.5e-10 R_Transcript_10544:1-993(+)
KMSSSFDAFETEHQQNSDRPFDDGYLGYDPRLPSQRFDSSNFGDSFSGEISGAGDDEVTVEPAHEEDSFGSGNPSGDFSHQSPFGEAVLVSNGNGKPYDLGADDDGIFTSDGPVLPEPSQMQEEGFALREWRRENAIRLEGEKKEKEMRMQIIEEAEEYKHAFFEKRKLNIETSKTNNRDKEKIYLTNQEKFHKEADKQYWKAIAELIPHEVPNIEKRRGKKEQEKKPSITVVQGPKPGKPTDMSRMRQILVKLKHSPPPHMTPPKPEPAKDGKDGKDGKDAKTGKDAAKSPPGAAKGATPNSPEKPEKEATTTATAEQPTTEAEPVANA*

Click here to download the sequence:
Link to NCBI Protein BLAST