Transcript Information: R_Transcript_105504.p1


Annotated TAIR IDAT5G01720.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:267118-270391 | Reverse length=665
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2016194138931
Replicate 22.0319000402869
Replicate 32.0561447491637
Condition 2: 8 Hour
Replicate 12.5756519930482
Replicate 22.226679678435
Replicate 32.4439756235023
Condition 3: 24 Hour
Replicate 12.672507713744
Replicate 23.1242372341491
Replicate 33.0698043039127


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105504.p1 GENE.R_Transcript_105504~~R_Transcript_105504.p1 ORF type:complete len:713 (+),score=91.24,LRR_4|PF12799.3|0.67,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|1,LRR_4|PF12799.3|9.6,LRR_4|PF12799.3|5,LRR_4|PF12799.3|2,LRR_4|PF12799.3|32,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.052,LRR_6|PF13516.2|7.4e+03,LRR_6|PF13516.2|4.5e+02,LRR_6|PF13516.2|7,LRR_6|PF13516.2|5.7e+03,LRR_6|PF13516.2|7.8,LRR_6|PF13516.2|7e+02,LRR_6|PF13516.2|58,LRR_6|PF13516.2|88,LRR_6|PF13516.2|28,LRR_6|PF13516.2|1.2e+02,LRR_6|PF13516.2|1.3e+03,LRR_6|PF13516.2|1.8,LRR_6|PF13516.2|3.9e+02,LRR_6|PF13516.2|1.3e+03,LRR_6|PF13516.2|3.8e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|22,LRR_6|PF13516.2|2.2e+02,LRR_6|PF13516.2|1.6e+04,LRR_8|PF13855.2|2.4e+03,LRR_8|PF13855.2|0.087,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|20,LRR_8|PF13855.2|5.7,LRR_8|PF13855.2|4.6e+03,LRR_8|PF13855.2|4.3,LRR_8|PF13855.2|8.8,LRR_8|PF13855.2|1.4e+02,LRR_8|PF13855.2|9.4 R_Transcript_105504:178-2139(+)
ATGGAGGAGGTGCTGAACCCCGAGTTGATATACCAAATACTGGACAAACTGGATCCACAGAGCTTGAAATCCATGTCTCTGGTCTGCAAATCGTTTCATAAGGCCGAGTCTACTCATCGGAAAACCCTGAAGCTCCTCCGACCAGACCTCCTTGACTGTGTCCTTGCCCGTTACCCAGCTCTTTCTCATCTCGACCTTTCTCTCTGCCCTCGCCTTCATGATTCTCTCCTTATAACGGCCTCTTCTTTGCATTCCTCCTTGCAATCCCTCAAGATTACCCCATGTTCGGTAAGCGCCTCAGGGATATCGGTTCTGGTATCAAATTGTCCAAATCTGAAAGAGCTGGACCTGTCTCACGCAACACAGCTGAGTGACTCAGCAGCCTCAGCTATTGGTGGGGCCAAGAATCTGGAAAGGCTGACAATGGTGAGATGTAAACAGGTTTCAGATATGGGATTAGCTTGTATTGCTGTTGGCTGTAAGAATCTCAAGTTCCTTAACTTGAAATGGTGCTTGCGTCTTACCGATTCTGGGATTTCACTTGTTGCTCTCAGATGCCCCCTTCTTCGTTCCTTGGATCTCTCCTATGTCCCTATCACAGAGAAGTGCCTTAAGCCAATCTTGCAACTACCTCATCTGGAAGAGTTGGTCCTGATGGCCTGCCATGGCATTGATGACGACGGCCTTCCTTCTCTCCACCAAGCTTCCCACTCTTTGACGACTCTTGATTTGTCCTATTGTCAGAAAATCAGTCACATTGGTCTCTCCCATTTGACTAGAGATGCTCAACTCTTGCACCACATTATCTTGTCCTATGGTTTTGCTATCACTGTAGACTTGGCCAAATGTCTTGAGAAATTCTCAAGGATACAGTGTCTAAAGTTAGATGGATGCACAGTCACTTGTTCTGCTTTGAGAACCATAGGAAACTGGTCTGCCTCCCTGAAAGAACTTAGCTTGAGTAAATGCTCTGGTGTCACTGATGAGGGTATCTCCTCTCTTGTAAAGAGACATACACAACTGACAAAGCTAGACATTACGTGCTGCCGCAAGATTTCTTCCGTCTCCATTCACTCCATCACTTCCTCATGTACTTCTCTCACTTCCCTTAAAATGGAGGCTTGTGCCCTTGTCTCTAAACAAGCTTTTCCCTTGATTGGCCACCATTGTCCATACTTGGAGGAATTGGATGTCACTGACAATGATTTAGATGATCAAGGTTTGAAGTCCATCTCAAGATGTTCTAGTCTCTCCATCTTGAAGTTAGGGATATGCCTTAATATCACCGATGAAGGGCTGATTCAAGTTGGCATGAACTGCTCTAGGCTTAAGGAGATTGATTTATACCGGGCCATGAGAATAACAGATGTAGGCATTGCATCGGTAGCTCAAGGTTGCCCTACTCTCGAGTTGATTAACATAGCGTATTGTGATCAAGTCACCGATGCCTCTCTAATATCGTTATCAAAGTGCTCGAGATTAAAAGCATTGGAAATGAGAGGATGCCCTCATATCACGTCAGTGGGTTTAGCAGCCATTTCTGCAGGATGCAGGCAACTCACTGTACTAGACATAAAGAAATGTTTCAAAATCGACAATTCTGGGATGATTCCACTAGCTCATTATTCTCAAAACCTCAGACAGATAAACTTGTCCTATTGTTCAATTACGGATGTGGGGCTGTTGGCGCTAGCCAGCATAAGCAGATTACAAAACATGACGATCTTGCACCTTGCTGGGCTGAGCCCAAATGGGTTAGCGGCTGCCCTGCTAGCCTGCGGGGGACTGAGGAAGGTGAAGCTCCATTCTTCCTTTAGAGCTCTGCTTCCTCAATCTCTTCTCGACCACATGGAAAGCCGTGGATGTGTATTTCATTGGAGAGACAAAGCATTTCAGCCTCAGGTTGACGCAGACCCATTGGAGTGGAACCTACAGATAGGAAGACCCCCCTCACCAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105504.p1 GENE.R_Transcript_105504~~R_Transcript_105504.p1 ORF type:complete len:713 (+),score=91.24,LRR_4|PF12799.3|0.67,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|1,LRR_4|PF12799.3|9.6,LRR_4|PF12799.3|5,LRR_4|PF12799.3|2,LRR_4|PF12799.3|32,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.052,LRR_6|PF13516.2|7.4e+03,LRR_6|PF13516.2|4.5e+02,LRR_6|PF13516.2|7,LRR_6|PF13516.2|5.7e+03,LRR_6|PF13516.2|7.8,LRR_6|PF13516.2|7e+02,LRR_6|PF13516.2|58,LRR_6|PF13516.2|88,LRR_6|PF13516.2|28,LRR_6|PF13516.2|1.2e+02,LRR_6|PF13516.2|1.3e+03,LRR_6|PF13516.2|1.8,LRR_6|PF13516.2|3.9e+02,LRR_6|PF13516.2|1.3e+03,LRR_6|PF13516.2|3.8e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|22,LRR_6|PF13516.2|2.2e+02,LRR_6|PF13516.2|1.6e+04,LRR_8|PF13855.2|2.4e+03,LRR_8|PF13855.2|0.087,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|20,LRR_8|PF13855.2|5.7,LRR_8|PF13855.2|4.6e+03,LRR_8|PF13855.2|4.3,LRR_8|PF13855.2|8.8,LRR_8|PF13855.2|1.4e+02,LRR_8|PF13855.2|9.4 R_Transcript_105504:178-2139(+)
MEEVLNPELIYQILDKLDPQSLKSMSLVCKSFHKAESTHRKTLKLLRPDLLDCVLARYPALSHLDLSLCPRLHDSLLITASSLHSSLQSLKITPCSVSASGISVLVSNCPNLKELDLSHATQLSDSAASAIGGAKNLERLTMVRCKQVSDMGLACIAVGCKNLKFLNLKWCLRLTDSGISLVALRCPLLRSLDLSYVPITEKCLKPILQLPHLEELVLMACHGIDDDGLPSLHQASHSLTTLDLSYCQKISHIGLSHLTRDAQLLHHIILSYGFAITVDLAKCLEKFSRIQCLKLDGCTVTCSALRTIGNWSASLKELSLSKCSGVTDEGISSLVKRHTQLTKLDITCCRKISSVSIHSITSSCTSLTSLKMEACALVSKQAFPLIGHHCPYLEELDVTDNDLDDQGLKSISRCSSLSILKLGICLNITDEGLIQVGMNCSRLKEIDLYRAMRITDVGIASVAQGCPTLELINIAYCDQVTDASLISLSKCSRLKALEMRGCPHITSVGLAAISAGCRQLTVLDIKKCFKIDNSGMIPLAHYSQNLRQINLSYCSITDVGLLALASISRLQNMTILHLAGLSPNGLAAALLACGGLRKVKLHSSFRALLPQSLLDHMESRGCVFHWRDKAFQPQVDADPLEWNLQIGRPPSPN*

Click here to download the sequence:
Link to NCBI Protein BLAST