Transcript Information: R_Transcript_105556.p1


Annotated TAIR IDAT2G40070.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16728378-16731160 | Reverse length=607
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.380348496468
Replicate 27.6511942194984
Replicate 38.2503080325125
Condition 2: 8 Hour
Replicate 15.4989442466271
Replicate 22.8424849798117
Replicate 32.0766673167392
Condition 3: 24 Hour
Replicate 13.7938749232223
Replicate 21.9625442233141
Replicate 32.1331237618586


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105556.p1 GENE.R_Transcript_105556~~R_Transcript_105556.p1 ORF type:complete len:236 (+),score=8.65 R_Transcript_105556:272-979(+)
ATGTGCCCGTTCAACCTCAGCTCGAAGCACTCAAAGCACAACGCTCCTAGCCCATCTCGCGTACAGCTCACTCGTACGCTCCACTGCCCATTGCTTCACAAGAAGCTCAAGCATCACGCTGCCCATGTTCCACCCCAACTCAGGAGCAGTTCCAAGAGCGTCAAGCGCCCAAGCAACATATACAACAGCAACGCCCAGCGCATCGTCCCAGAAGCTCGTCCAACAGCTCCAAGCTTCACGTCTCAACTGCCTACACCACGTCCACAAGCAAAACGTGCAACAGCAGCTCCTCTATCACCAACTCCATCACTACACATCATCCAGCAACGTAGCACAGCTCCCTCACGCCCCATGCCCACATGTTCAAGCGTACAAACTCCATGCTCCTTGCTACGTCACAGCAGCACGTCCCAAGCTCACTACATGCAGCCCCATCATTCCACTCGAGCAAAAAGCACATCCAGGACACAAGACAAGCACGCCAGTCCACGCACTACCCACTTGCATCACCCATTCCAGCTCACTCCTCCTCGAGAAGAACACACGCCCATCATAAGCACCTCACTGTACCACTCCCAACTCACGTTCCAGCTCAGCAAAGCAGCCTCCAACTCATCACAAGTGGCTCACTGTCCCACGTCCAACTCAAGCTCCACTTACCCGACAAACTCCATCAAGGCATCCAACATACAACCCACCATCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105556.p1 GENE.R_Transcript_105556~~R_Transcript_105556.p1 ORF type:complete len:236 (+),score=8.65 R_Transcript_105556:272-979(+)
MCPFNLSSKHSKHNAPSPSRVQLTRTLHCPLLHKKLKHHAAHVPPQLRSSSKSVKRPSNIYNSNAQRIVPEARPTAPSFTSQLPTPRPQAKRATAAPLSPTPSLHIIQQRSTAPSRPMPTCSSVQTPCSLLRHSSTSQAHYMQPHHSTRAKSTSRTQDKHASPRTTHLHHPFQLTPPREEHTPIISTSLYHSQLTFQLSKAASNSSQVAHCPTSNSSSTYPTNSIKASNIQPTIK*

Click here to download the sequence:
Link to NCBI Protein BLAST