Transcript Information: R_Transcript_105607.p1


Annotated TAIR IDAT5G46550.1
Annotated Gene NameDNA-binding bromodomain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18884439-18886503 | Reverse length=494
E-Value7.8E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8674562545917
Replicate 23.5532200704504
Replicate 34.8554452340562
Condition 2: 8 Hour
Replicate 14.478611195479
Replicate 24.8926373943107
Replicate 34.9335146814385
Condition 3: 24 Hour
Replicate 14.8270261350557
Replicate 24.1471426973735
Replicate 35.3877426921593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105607.p1 GENE.R_Transcript_105607~~R_Transcript_105607.p1 ORF type:5prime_partial len:585 (+),score=138.11,Bromodomain|PF00439.21|7.1e-21 R_Transcript_105607:2-1756(+)
TTCTTTCTTCCTCTTCCTGCATCTCGCCATCTCTCCTCACACTCAAAACGCCCTAACAGGCTTTTCTTTCGTCCTCCTACAATAACCCCCATCAACGCAGAGCTGAGCTTCAACAACAGCACCCACCAACTCACGACAGATATGGGTTTGGCTGAAGTAGAAACAAGTGTTGCAGAGAAGCCTGTTGTAGGAAAGAAACTGAAGTTAAAGTTCTGTGCGACAAAGCCATTGATTAGTGCATGTGAAGTCTCAAAGAATGTGCGTATTGGGGACTGCTTGAAAATGGCAGCATCAACTAACATTGAGAGGACAGCCTCTGCTGCCAATAAAAAGCTTATCTGCCCTAATCGAGGAACAAAGCGTAGGCTTGAAGGACCAGTAGAATGTCAGAATAATAAGAAATTTAAGATGGGTCGACAATTAACGTTGTACTGCAAAAGCATTCTTTCAAAGCTAATGAAACAGAGAAATAGCGATGTCTTCAATAAGCCAGTCGATCCTGTTACATTGGGCATCCCTGACTATTTTGAGTTTATTAAAAATCCTATGGATCTGGGAACAATTAAGCAGAAACTGGATCGTAACCTCTACTGTGATGCTGAAGAGTTTGCATATGATGTGAGGCTTACATTTTCAAATGCCATGCGATACAATCCTCCTAAGAATTTGGTTCATCAACTTGCAAAGCAGATGATGTCAAGTTTTAATTACGATTGGAAAATGCTAAGAGTGAAATTGGGTGGACAGTGTGAAGCAAGAAAACTGAGTCTTGAGAAGAGCAATAAGGAAGTGCAGCAGAGAGAGGCAGCGTCTGTCAAAGATGGGATGGCCAAAGACTCCAAGTGGTTAAAGACCTGCAGGCCTGATCCAGATTTGTGTGGGCCTCCTCGTCCGTGCACAGAAAAAGCTTGTAAAAAAGCACAAAATTCAAGGCCACTACAATCTGTAGCAGTGGTGAAGGGCGAAGAAGTATCAGCACCTTGCAATAAGGGCCAGCATGATGAGTTGAAAGCTGTTGAGGTCAATAACACATCAACATCAATACTGAGCCAATCTGATCCTGGTTCCAATGGTGCTGTGAGTTGTCTCGATGAAGAGCATGCTTGTGCTAGTTGTGTTAAAACTAGTTCAGTTGGTTCCACCACTGAAGGCCTGGAAACCTTGTTAGACATCGAGCTCTCTCCGTCAAAAGCGTTGCGCGCTGCAATGTTGAAGAGCCGTTTTGCTGATACTATCCTGAAAGCTCAACATAAGACTCTTCTGCAGCCTGGTGGCAGAACTGACAAAGCGAAGTTGCAGCAAGAGAAAGAGAGACTGGAGAGGAGGCAGCATGAAGAGAAAATGAGGATAGAAGCTCAGATTAGAGCTGCTGAATCAGCTGCACGATCCAAAGCAGAGTCTGAACTGAAAAAACAACAGGATCAAGAGAGATTGGCTGAATCTGAACTGAAAAAACAACGGGATCAAGAGAGATTGGCTGCTCGTATTGCACTCGAAAAGATGGAAAGGTCCATCGATCTGGATGACAATTTCCACATCCTCAGAGAACTCGAGTCCCTTGTTGGTACCTCATTGTTTGTATTGCGCCAATGTGATGATTCCAGATCTCGTGTTATGGTGAATCAGTTTCAGAATGGCAAGTTGGGAAGCCCCTTGGAGCGCCTTGGGTTATTCATAAAGGCAGAGTACATGGTTGGTGACGGTGATGAAGATTTACTTATAGAGGATTGGGAAGAGGGGGAGGTGGTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105607.p1 GENE.R_Transcript_105607~~R_Transcript_105607.p1 ORF type:5prime_partial len:585 (+),score=138.11,Bromodomain|PF00439.21|7.1e-21 R_Transcript_105607:2-1756(+)
FFLPLPASRHLSSHSKRPNRLFFRPPTITPINAELSFNNSTHQLTTDMGLAEVETSVAEKPVVGKKLKLKFCATKPLISACEVSKNVRIGDCLKMAASTNIERTASAANKKLICPNRGTKRRLEGPVECQNNKKFKMGRQLTLYCKSILSKLMKQRNSDVFNKPVDPVTLGIPDYFEFIKNPMDLGTIKQKLDRNLYCDAEEFAYDVRLTFSNAMRYNPPKNLVHQLAKQMMSSFNYDWKMLRVKLGGQCEARKLSLEKSNKEVQQREAASVKDGMAKDSKWLKTCRPDPDLCGPPRPCTEKACKKAQNSRPLQSVAVVKGEEVSAPCNKGQHDELKAVEVNNTSTSILSQSDPGSNGAVSCLDEEHACASCVKTSSVGSTTEGLETLLDIELSPSKALRAAMLKSRFADTILKAQHKTLLQPGGRTDKAKLQQEKERLERRQHEEKMRIEAQIRAAESAARSKAESELKKQQDQERLAESELKKQRDQERLAARIALEKMERSIDLDDNFHILRELESLVGTSLFVLRQCDDSRSRVMVNQFQNGKLGSPLERLGLFIKAEYMVGDGDEDLLIEDWEEGEVVF*

Click here to download the sequence:
Link to NCBI Protein BLAST