Transcript Information: R_Transcript_105655.p1


Annotated TAIR IDAT5G60250.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24252226-24254710 | Forward length=655
E-Value1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4961443405507
Replicate 20.93426161102966
Replicate 31.5020811538461
Condition 2: 8 Hour
Replicate 11.7203183803685
Replicate 21.5710221434088
Replicate 32.3805390977557
Condition 3: 24 Hour
Replicate 11.8280221211755
Replicate 21.1879881838016
Replicate 31.999111200911


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105655.p1 GENE.R_Transcript_105655~~R_Transcript_105655.p1 ORF type:complete len:427 (+),score=71.43,RVT_3|PF13456.2|1.3e-10,zf-C3HC4|PF00097.21|2.4e-05,zf-C3HC4|PF00097.21|1.2e+03 R_Transcript_105655:173-1453(+)
ATGGCAACTAAAATGGAGTACGAAGATTACGACGACAAGAAAACCCTAATTTCAGAGCAGCAAAGAGAGTTAATGGCAGACAAAGCTACTGAATCAGACTTGAACTTAGCCTTTGATCTCCAAATGCAAGAAGCCCTAACTGCTTCTCTCTTTGTCTCTCCATCTTCACATCCTCCATCTCCATTTCCTTCATCACTATCATCAGAACAACGAGAATTATCAATCTCTGATATTCTGTTAAGCGAAATCGAGAGGTACGAGCAAGAAAGGAAGGATTTTGAACTTTGCAAGCTCGAAACGAAGAGATTGAAGCAAGACCTAAGTGTTCGATTACACGATCGAAATTTCGCTTCAGAGATTAATCGAATTTCTGATCGTGAATGGCGAGTTAATGGCGATAACATTCACAAACCCTTAGGTTTAGGGTTTGGCGATGAAAAGGAGTGTTTTAGGTTGTATTTCAAGGGGATTGTGGTTGTTGATCAGAGTGATAAGAAGATGAAGAAGGATACTTCGTTGAAGGCGATAGGAGTCGCGATTTGTGACTCGAGAGATAACGTGATATTCGAGTTGTCGAAGCCAATGGTGTTGGAGGAAGGAAGTAGTGAGAGAGAAATGAGGGTTCAGATTGAAGCTTTGATTCAAGGACTTAATGCTGCTTTGAGTTTGGATTTGAAGAGAATTCAATATTACTGTGATGACTTCATGCTATACCTATATGTTAGTGGCAGACATCAACCTACTGAACGCACTATGATAAATCTGATAAAGAGTGTGAATCTTCTTCATGAAAAGTTTGTTTACTGCAATCCATTGCTTGTTGCTCGAACCGAAATCAAGTTTGCTTTCAAGCTTGCTAGATCTTGCTTATCTCAGGCTATTAGATCAGCAGGTAGCTCTAGGAAGGATGTAACAGTGGCTTGCTCAATATGCTTTGAAGATACAAATGCTCAGCTCATGTTTACAGTTGATAGTTGTCGGCACCAATACTGCTCATTTTGCATAGAGCAACATGTGGAGGTGAAGCTACTTCATGGGGACTTACCCAAATGCCCTCATGAAGGTTGTAAATCTGCGATAACTATTGATAGCTGCCGAAACGTCTTGGAACCCAAGTTTCTGGAGATTATGAATCAACGTGTGAGGGAAGCCACTATTCCTGCTTCTCAAAAAATTTATTGCCCCAACTCGACCTGCTCTGCATTGATGTCTAGGGATGAGGTGAAGGATTTTAGCAAGTCAACAACAGTGAGAGGGAAAGAGCTGGGAGCATGCTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105655.p1 GENE.R_Transcript_105655~~R_Transcript_105655.p1 ORF type:complete len:427 (+),score=71.43,RVT_3|PF13456.2|1.3e-10,zf-C3HC4|PF00097.21|2.4e-05,zf-C3HC4|PF00097.21|1.2e+03 R_Transcript_105655:173-1453(+)
MATKMEYEDYDDKKTLISEQQRELMADKATESDLNLAFDLQMQEALTASLFVSPSSHPPSPFPSSLSSEQRELSISDILLSEIERYEQERKDFELCKLETKRLKQDLSVRLHDRNFASEINRISDREWRVNGDNIHKPLGLGFGDEKECFRLYFKGIVVVDQSDKKMKKDTSLKAIGVAICDSRDNVIFELSKPMVLEEGSSEREMRVQIEALIQGLNAALSLDLKRIQYYCDDFMLYLYVSGRHQPTERTMINLIKSVNLLHEKFVYCNPLLVARTEIKFAFKLARSCLSQAIRSAGSSRKDVTVACSICFEDTNAQLMFTVDSCRHQYCSFCIEQHVEVKLLHGDLPKCPHEGCKSAITIDSCRNVLEPKFLEIMNQRVREATIPASQKIYCPNSTCSALMSRDEVKDFSKSTTVRGKELGACW*

Click here to download the sequence:
Link to NCBI Protein BLAST