Transcript Information: R_Transcript_105683.p1


Annotated TAIR IDAT1G49220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18205946-18206701 | Forward length=251
E-Value4E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.281992364186
Replicate 22.9994714880426
Replicate 34.447095577275
Condition 2: 8 Hour
Replicate 112.198086567126
Replicate 213.924358655683
Replicate 310.505327758319
Condition 3: 24 Hour
Replicate 14.8774828542375
Replicate 22.9891742818731
Replicate 32.8061159854997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105683.p1 GENE.R_Transcript_105683~~R_Transcript_105683.p1 ORF type:5prime_partial len:273 (+),score=14.21,zf-RING_2|PF13639.2|7e+03,zf-RING_2|PF13639.2|3.8e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|5e-11,zf-rbx1|PF12678.3|5.4e+02,zf-rbx1|PF12678.3|4e-08 R_Transcript_105683:2-820(+)
TCCTTTTTATTATCAATTTGCCCTTCTCTTTATATTCTTCCCAAACAAACCTTCACTAGTCACCACCCCCTCAAAAAAAAAAAAAAAAAACTAATCATTTTTCCTATCTCCCAAAAAAAAACAACAAACATGTTATCAACTTCTACTACTACTTCACAACCACCACTTGAACTCATAACCAACCTTCACTACCACAGAAGATGGCTACTCCAAACCAACTTCTACCACCCACAACCAGCACCACCAGATGTCAAACCCGACCCATCGACCCATCCGGGTTTCGACACCAACTTAGCCATGGTCCTAGCAGTCTTATTATGTGCCTTAGTGTGCTCCTTATGTGTTAATTCCTTAATTAGGTGTGTGCTTAAGTGCTCAAGCTTCGTAATTAGAGAGCCTAATTACTACATCAACAGAACCCAATTGCCAGGCATAGATGTTGGGTTAGATAAAAGAGCATTGAGAACATTCCCAATAGTTAAATACTCAAAAGATGTCAAGATTCAGGGGTTGGAAAAAGTTTGTGCAATTTGTTTGTCAGAGTTCAGAAAAGCAGAAAAACTGAGGATTTTGCCTAAGTGTAACCATGGTTTTCATGTCAAGTGTGTTGATAAGTGGCTTAAATGTCACTCTTCTTGCCCTACTTGTAGACAGTCTTTGATTGATACTTGTGAGAAGATTACTACAAGTGATAATCATATTCATCAAATTCAAGGAAGTTCTTCTTCATCTGTTCCAGGTACAGGGGAGGTTGTTAGTGTTAGTGTTAGTGTTCTGCCATTAGAAAGGGAAGATTTGTTTAGAAATTACAGGGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105683.p1 GENE.R_Transcript_105683~~R_Transcript_105683.p1 ORF type:5prime_partial len:273 (+),score=14.21,zf-RING_2|PF13639.2|7e+03,zf-RING_2|PF13639.2|3.8e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|5e-11,zf-rbx1|PF12678.3|5.4e+02,zf-rbx1|PF12678.3|4e-08 R_Transcript_105683:2-820(+)
SFLLSICPSLYILPKQTFTSHHPLKKKKKKLIIFPISQKKTTNMLSTSTTTSQPPLELITNLHYHRRWLLQTNFYHPQPAPPDVKPDPSTHPGFDTNLAMVLAVLLCALVCSLCVNSLIRCVLKCSSFVIREPNYYINRTQLPGIDVGLDKRALRTFPIVKYSKDVKIQGLEKVCAICLSEFRKAEKLRILPKCNHGFHVKCVDKWLKCHSSCPTCRQSLIDTCEKITTSDNHIHQIQGSSSSSVPGTGEVVSVSVSVLPLEREDLFRNYRG*

Click here to download the sequence:
Link to NCBI Protein BLAST