Transcript Information: R_Transcript_105706.p1


Annotated TAIR IDAT2G21960.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9354990-9356958 | Forward length=332
E-Value1.2E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23476477112179
Replicate 20.20253665996429
Replicate 30.22096531443234
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.2815138866482


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105706.p1 GENE.R_Transcript_105706~~R_Transcript_105706.p1 ORF type:complete len:311 (+),score=89.17 R_Transcript_105706:174-1106(+)
ATGTCAGTGGTTGCAGTCATTGGTGCTGGGCTTGCTTCTCTCCACCCACCTCATTGCAGAAATCTCCTCTTTCATGATCATCATGATATCAATTACCCATCATTATCCAGATTCAATAATGGGTCTGTTAAGAAACGGTTGAATTTTATCAGGTCATCATCTTCATATTCTTCTTCTGCTGCTGTTCCTGCTGTTGATTTCAGCCCTCTTGAATCTGCCCTTGAAAAGAAGGACAGTGATGCTGTCAAGGAGGCACTTGATCAATTAAGTGAAGTTGGTTGGGCCCAAAAATGGAGTTCCCAGCCATATGTTTCCCGTCGAACGACAACTCTTCGAGAGCTCACAACTCTTGGAATAAAGAATGCTGAGACGCTTGCTATCCCAAGTGTGAGAAATGATGCAGCTTTCCTATTTACGGTGGTTGGCACAACAGGATTTTTAGCTCTTCTTGCTGGTCAACTTCCAGGGGACTGGGGCTTCTTTGTGCCATACTTGATTGGAAGCATCTCTTTAGTGGTCTTGGCCGTGGGAAGCACTGCTCCAGGACTACTGCAGGCAGCCATCGGTGGGTTCTCATCAGTTTTTCCTGATTATCAAGAAAGGATTGCGCGACATGAAGCTGCTCACTTTTTAGTTGCGTATTTGCTTGGCTTGCCGATTTTAAATTATTCCCTTGATATTGGGAAAGAGCATGTAAACCTCATCAATGACAAGTTGGAGAAGCTTATATACAGCGGGCAGCTTGATGCCAAAGAGCTTGACAGGTTGGCTGTTGTGTCAATGGCTGGGTTGGCTGCTGAAGGGCTGACATATGACAAGGTGGTTGGTCAATCTGCTGATCTTTTCTCCCTTCAGGACAAGTTGTTTGAAAGTACAAGTTTTATGATAGCTGCTCTTGACTTTTGCCCTTCAGAGATTTATAAACAGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105706.p1 GENE.R_Transcript_105706~~R_Transcript_105706.p1 ORF type:complete len:311 (+),score=89.17 R_Transcript_105706:174-1106(+)
MSVVAVIGAGLASLHPPHCRNLLFHDHHDINYPSLSRFNNGSVKKRLNFIRSSSSYSSSAAVPAVDFSPLESALEKKDSDAVKEALDQLSEVGWAQKWSSQPYVSRRTTTLRELTTLGIKNAETLAIPSVRNDAAFLFTVVGTTGFLALLAGQLPGDWGFFVPYLIGSISLVVLAVGSTAPGLLQAAIGGFSSVFPDYQERIARHEAAHFLVAYLLGLPILNYSLDIGKEHVNLINDKLEKLIYSGQLDAKELDRLAVVSMAGLAAEGLTYDKVVGQSADLFSLQDKLFESTSFMIAALDFCPSEIYKQE*

Click here to download the sequence:
Link to NCBI Protein BLAST