Transcript Information: R_Transcript_105715.p1


Annotated TAIR IDAT2G21960.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9354990-9356958 | Forward length=332
E-Value5.4E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0509271912786
Replicate 23.1464196589265
Replicate 33.6967645688315
Condition 2: 8 Hour
Replicate 13.1754003533892
Replicate 22.255420358621
Replicate 32.720126087205
Condition 3: 24 Hour
Replicate 11.7201815213842
Replicate 22.0974741884411
Replicate 32.7753861850821


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105715.p1 GENE.R_Transcript_105715~~R_Transcript_105715.p1 ORF type:complete len:347 (+),score=94.86 R_Transcript_105715:174-1214(+)
ATGTCAGTGGTTGCAGTCATTGGTGCTGGGCTTGCTTCTCTCCACCCACCTCATTGCAGAAATCTCCTCTTTCATGATCATCATGATATCAATTACCCATCATTATCCAGATTCAATAATGGGTCTGTTAAGAAACGGTTGAATTTTATCAGGTCATCATCTTCATATTCTTCTTCTGCTGCTGTTCCTGCTGTTGATTTCAGCCCTCTTGAATCTGCCCTTGAAAAGAAGGACAGTGATGCTGTCAAGGAGGCACTTGATCAATTAAGTGAAGTTGGTTGGGCCCAAAAATGGAGTTCCCAGCCATATGTTTCCCGTCGAACGACAACTCTTCGAGAGCTCACAACTCTTGGAATAAAGAATGCTGAGACGCTTGCTATCCCAAGTGTGAGAAATGATGCAGCTTTCCTATTTACGGTGGTTGGCACAACAGGATTTTTAGCTCTTCTTGCTGGTCAACTTCCAGGGGACTGGGGCTTCTTTGTGCCATACTTGATTGGAAGCATCTCTTTAGTGGTCTTGGCCGTGGGAAGCACTGCTCCAGGACTACTGCAGGCAGCCATCGGTGGGTTCTCATCAGTTTTTCCTGATTATCAAGAAAGGATTGCGCGACATGAAGCTGCTCACTTTTTAGTTGCGTATTTGCTTGGCTTGCCGATTTTAAATTATTCCCTTGATATTGGGAAAGAGCATGTAAACCTCATCAATGACAAGTTGGAGAAGCTTATATACAGCGGGCAGCTTGATGCCAAAGAGCTTGACAGGTTGGCTGTTGTGTCAATGGCTGGGTTGGCTGCTGAAGGGCTGACATATGACAAGGTGGTTGGTCAATCTGCTGATCTTTTCTCCCTTCAGAGATTTATAAACAGGAGTAAGCCACAGCTCACCAAAGAACAGCAGCAGAACCTAACTCGATGGGCTGTACTGTTCGCTGGATCTCTCTTGAAGAACAATAAAGCAGTTCATGAAGCTCTGATGGCTGCAATGTCAAATAAAGCAACCGTGCTCGAATGCATTAAAGCTATTGAAATGGCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105715.p1 GENE.R_Transcript_105715~~R_Transcript_105715.p1 ORF type:complete len:347 (+),score=94.86 R_Transcript_105715:174-1214(+)
MSVVAVIGAGLASLHPPHCRNLLFHDHHDINYPSLSRFNNGSVKKRLNFIRSSSSYSSSAAVPAVDFSPLESALEKKDSDAVKEALDQLSEVGWAQKWSSQPYVSRRTTTLRELTTLGIKNAETLAIPSVRNDAAFLFTVVGTTGFLALLAGQLPGDWGFFVPYLIGSISLVVLAVGSTAPGLLQAAIGGFSSVFPDYQERIARHEAAHFLVAYLLGLPILNYSLDIGKEHVNLINDKLEKLIYSGQLDAKELDRLAVVSMAGLAAEGLTYDKVVGQSADLFSLQRFINRSKPQLTKEQQQNLTRWAVLFAGSLLKNNKAVHEALMAAMSNKATVLECIKAIEMAS*

Click here to download the sequence:
Link to NCBI Protein BLAST