Transcript Information: R_Transcript_105789.p1


Annotated TAIR IDAT5G06940.1
Annotated Gene NameLeucine-rich repeat receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2148078-2150771 | Reverse length=872
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7001918652278
Replicate 24.237133905882
Replicate 34.9842168613951
Condition 2: 8 Hour
Replicate 14.3616309601632
Replicate 24.5629307928462
Replicate 34.8499793878599
Condition 3: 24 Hour
Replicate 17.6353473868914
Replicate 25.3957059518098
Replicate 35.6755040338065


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105789.p1 GENE.R_Transcript_105789~~R_Transcript_105789.p1 ORF type:complete len:887 (+),score=173.34,Pkinase_Tyr|PF07714.13|4.9e-37,Pkinase|PF00069.21|8.9e-35,LRR_8|PF13855.2|21,LRR_8|PF13855.2|2.8e-06,LRR_8|PF13855.2|2.8e-07,LRR_8|PF13855.2|4.9e-06,LRR_8|PF13855.2|0.002,LRR_8|PF13855.2|1e-06,LRR_8|PF13855.2|0.0058,LRR_8|PF13855.2|13,LRR_8|PF13855.2|2.1e-06,LRR_4|PF12799.3|31,LRR_4|PF12799.3|6.7,LRR_4|PF12799.3|0.73,LRR_4|PF12799.3|0.0044,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|0.0079,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|82,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.46,LRR_4|PF12799.3|0.063,LRRNT_2|PF08263.8|1.8e-12,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|11,LRR_1|PF00560.29|39,LRR_1|PF00560.29|66,LRR_1|PF00560.29|0.14,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|8.9e+02,LRR_1|PF00560.29|1.7e+03,LRR_1|PF00560.29|3.9e+02,LRR_1|PF00560.29|17,LRR_1|PF00560.29|0.081,LRR_1|PF00560.29|1.4e+03 R_Transcript_105789:517-3177(+)
ATGGCTACCTTCTATCCCTTCTTTCTTCTCTTTCTGTCATTACTTCTTCCCATTAACAGCTCTTCATTAACTGAATCTGACATTCTTCTTACCTTCAAATCTTCCATTAATGACCCTTCTCATTCCCTTTCTTCCTGGTCCAATACTTCTACTTCAAATTACTGCAATTGGACTGGCATCACCTGCAGTGATTCTACTGTTACTGTCATCTCACTTGACCTTCAGAGTTTCAATCTTTCTGGTGAACTAAACCCTGTAATCTGTGAGCTTTCAAGTCTTTCTTCACTCAACCTTGCTAATAATATCTTCAATGAACCAATCCCACTTCACTTTTCTCAATGTGAGTCTTTACTGAGCCTCAATCTTAGCGGTAATCTCATCTGGGGTACAATCCCAGATCAGATATCTCAGTTTAAGTCCTTGAAAGTGATTGATTTGAGCAAGAATCATATCGAGGGGAAAATCCCAGAAGGGATCGGGTTGTTGGAAAACTTGCAAGTTCTCAACCTTGGGAGCAACCTGCTCTCCGGTAATGTCCCTCAAGAAGTTTTAGGTAATTTCACTCAGCTTGTTGTTCTTGACTTGTCTGAGAATCCTTTCTTGGTAGGTGAGCTTCCTAGTGAGATTGGTAAACTAGACAAGCTTGAGCAGCTTTTACTGCATAACTCTGGGTTCTTGGGTGAGATTCCTGATTCTTTTCAAGGTTTAAAGAATTTAAAAGTGCTTGACCTTTCCCAGAATAACCTCACTGGTGAGCTCCCCAAGAATCTTGGAGTTTCTTTTGGAAACTTGGTGTCTTTTGATGTTTCAGCCAATAAGCTAAGTGGGTCATTCCCAGATGGGTTATGTAGTGGAAAAAAACTAACTAGTCTTAGTGTTCATACTAATTACTTCACTGGTTCTTTGCCTAAGAGTATTAGTCAATGCATGAATTTGGAAAAGTTTCAAGTTCATAATAATGGGTTTTCAGGTGATTTCCCATCTGGGTTATGGTCATTACCTAAACTTAGGGTCATTAGAGCTGAAAACAATAAATTTTCTGGTGAAATTCCTGATTCTGTATCAATGGCTGCACAGTTGGAGCAAGTTCAGATTGATAATAACAGCTTTAGTGGTGTAATCCCTCATGGTCTTGGACTTGTTAAAGGATTATACAGATTCTCTGCTTCAAACAACCATTTGTATGGAAAATTACCTCCTAATTTTTGTGACTCTCCTGTAATGAGCATCATAAATCTGTCTCAAAATTCACTATCAGGTGAAATTCCTGAGGTGAGGAAATGTGGGAAGTTAGTCTCATTGTCTTTGGCTAGCAACAGTTTTATAGGAGAAATACCACATTCACTTGGTGGTTTACCTGTCTTGACTTACCTTGATCTTTCTGATAACAATCTTACTGGTTCAATCCCATCAGAGCTTCAGAACTTGAAGCTTGCACTGTTTAATGTATCTTACAATAGATTATCAGGGAGCGTTCCCTTTTCATTAATCTCCGGCCTCCCAGCTTCGTACTTGGAAGGAAATCCTGATCTTTGTGGCCCGGGATTGCCTAATACCTCCTGTTTAAATGAAGGGAAAATGCACCAAGGAGGTGGTCTGACAAGACTGGTTTGTGCACTCATATCAGTAGCTCTAGTTGTTACTTTGGCTATGGCTGCTTTCGGGTTTGTCATGATTCGTCATCGTTCTAGGCAGAAATCGGAGGCAGGAGTTTGGAGGTCGGTCTTCTTCTATCCTTTGAGGATATCTGAGCAGGAATTAGTCATGGCCATCAGTGAGAAAACTGCCTTACGACGTGGTGGAACTTTTGGCAGGGTTCATATTATAAGCTTACCAAGTGGTGAGCTTGTTGCTGTGAAGAAGTTGGTGAATACTGGGAACCATTCAACTAAGGCCTTGAAGGGTGAAATCAAGACATTAGCCAAGATAAGGCATAAGAACATTGTCAAGATCCTGGGATTTTGTTTCTCTGACGATTCGATCTTTCTCATCTATGAGTACTTGCCCAAGGGGAGCTTGGGGGATATCATAGGCAGGCCTAATGTCAAGATGGAATGGAGTATTAGGTTGAGGATTGCGATTGGAGTAGCTCAAGCGTTGGCGTATCTTCATAATGATTACTCCCCACATCTACTGCACAGAAATGTGAAAGCAAACAATGTTCTTCTGGATTCTGACTTCGAGCCTAAGCTCACTGACTTTGCTCTCGACAGAATAGTGGGAGATTCTGCATTTCAGTCCACTTTGGCCTTTGAATCTCCATTTTCTTGTTATGTTGCACCAGAGTGTAAATATGACAAGAAAGCAACAGAACAGATGGACGTGTACAGTTTTGGTGTGGTGCTATTAGAACTGGTGACCGGAAGGCAAGCAGAAGCAGCAGATTCAGAAGAAGAATCCCTTGATATAGTGAAGTGGATTCGAAGGAAGATCAACATCGCTAATGGTGCTCAAAATGTTCTGGATCCTAGGATATTGAATTCGTCCCAGGAAGAGATGCTAGGAGCCCTTGAGATTGGTCTCCACTGTACTTCCATAATGCCAGAGAAACGGCCATCTATAGCCCAGGTTGCGAGAGCCCTTCAATCACTTGGTTCAAAGTCCAGCTCCCGGCACCTGGAGCTGATGTCCCCTATCAGCAATGATACACTTCCAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105789.p1 GENE.R_Transcript_105789~~R_Transcript_105789.p1 ORF type:complete len:887 (+),score=173.34,Pkinase_Tyr|PF07714.13|4.9e-37,Pkinase|PF00069.21|8.9e-35,LRR_8|PF13855.2|21,LRR_8|PF13855.2|2.8e-06,LRR_8|PF13855.2|2.8e-07,LRR_8|PF13855.2|4.9e-06,LRR_8|PF13855.2|0.002,LRR_8|PF13855.2|1e-06,LRR_8|PF13855.2|0.0058,LRR_8|PF13855.2|13,LRR_8|PF13855.2|2.1e-06,LRR_4|PF12799.3|31,LRR_4|PF12799.3|6.7,LRR_4|PF12799.3|0.73,LRR_4|PF12799.3|0.0044,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|0.0079,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|82,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.46,LRR_4|PF12799.3|0.063,LRRNT_2|PF08263.8|1.8e-12,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|11,LRR_1|PF00560.29|39,LRR_1|PF00560.29|66,LRR_1|PF00560.29|0.14,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|8.9e+02,LRR_1|PF00560.29|1.7e+03,LRR_1|PF00560.29|3.9e+02,LRR_1|PF00560.29|17,LRR_1|PF00560.29|0.081,LRR_1|PF00560.29|1.4e+03 R_Transcript_105789:517-3177(+)
MATFYPFFLLFLSLLLPINSSSLTESDILLTFKSSINDPSHSLSSWSNTSTSNYCNWTGITCSDSTVTVISLDLQSFNLSGELNPVICELSSLSSLNLANNIFNEPIPLHFSQCESLLSLNLSGNLIWGTIPDQISQFKSLKVIDLSKNHIEGKIPEGIGLLENLQVLNLGSNLLSGNVPQEVLGNFTQLVVLDLSENPFLVGELPSEIGKLDKLEQLLLHNSGFLGEIPDSFQGLKNLKVLDLSQNNLTGELPKNLGVSFGNLVSFDVSANKLSGSFPDGLCSGKKLTSLSVHTNYFTGSLPKSISQCMNLEKFQVHNNGFSGDFPSGLWSLPKLRVIRAENNKFSGEIPDSVSMAAQLEQVQIDNNSFSGVIPHGLGLVKGLYRFSASNNHLYGKLPPNFCDSPVMSIINLSQNSLSGEIPEVRKCGKLVSLSLASNSFIGEIPHSLGGLPVLTYLDLSDNNLTGSIPSELQNLKLALFNVSYNRLSGSVPFSLISGLPASYLEGNPDLCGPGLPNTSCLNEGKMHQGGGLTRLVCALISVALVVTLAMAAFGFVMIRHRSRQKSEAGVWRSVFFYPLRISEQELVMAISEKTALRRGGTFGRVHIISLPSGELVAVKKLVNTGNHSTKALKGEIKTLAKIRHKNIVKILGFCFSDDSIFLIYEYLPKGSLGDIIGRPNVKMEWSIRLRIAIGVAQALAYLHNDYSPHLLHRNVKANNVLLDSDFEPKLTDFALDRIVGDSAFQSTLAFESPFSCYVAPECKYDKKATEQMDVYSFGVVLLELVTGRQAEAADSEEESLDIVKWIRRKINIANGAQNVLDPRILNSSQEEMLGALEIGLHCTSIMPEKRPSIAQVARALQSLGSKSSSRHLELMSPISNDTLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST