Transcript Information: R_Transcript_105878.p2


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value1.6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63821541799716
Replicate 20.14682727563845
Replicate 30.48056092859061
Condition 2: 8 Hour
Replicate 10.34245964961182
Replicate 20
Replicate 30.38080302000812
Condition 3: 24 Hour
Replicate 10.16054410648744
Replicate 20.15423257965439
Replicate 30.45918261580904


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105878.p2 GENE.R_Transcript_105878~~R_Transcript_105878.p2 ORF type:complete len:143 (+),score=13.29 R_Transcript_105878:451-879(+)
ATGGCTCTTTGTTCTTGCTCATTTCCTGCACATTTTACACCAGCAGTATCTTCAGATCTCTTCAGGTCATGGAGAGTGGATCTCCACAATCAATCTCAACTGAAGTATCATCAGGTTAAGAGAAGGACTTTTGGAATCTGGGCATCATTGGCAGAAAGAGGGGATTATTACTCAGAAAGACCACCCACTCCCCTTTTGGATACCATCAACTATCCTATTCACTTGAAAAATCTCTCTACTAAGGAACTTAAACAACTCGCGGATGAATTGCGTTCTGAAGTGATCTTTATGTATCTAAAACCGGGGGTCATCTTGGTTCAAGCCTGGGCGTTGTTGAGCTTACGGTCGCTCTTCATTTTGTCTTCAATGCTCCTCAGGATAGGATTTTGTGGGATGTTGGTCACCAGACTTACCCTCACAAGATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105878.p2 GENE.R_Transcript_105878~~R_Transcript_105878.p2 ORF type:complete len:143 (+),score=13.29 R_Transcript_105878:451-879(+)
MALCSCSFPAHFTPAVSSDLFRSWRVDLHNQSQLKYHQVKRRTFGIWASLAERGDYYSERPPTPLLDTINYPIHLKNLSTKELKQLADELRSEVIFMYLKPGVILVQAWALLSLRSLFILSSMLLRIGFCGMLVTRLTLTRS*

Click here to download the sequence:
Link to NCBI Protein BLAST