Transcript Information: R_Transcript_105954.p1


Annotated TAIR IDAT1G75850.1
Annotated Gene NameVPS35 Homolog B
Annotated Gene Symbol(s)VPS35B
Annotation TypeHomolog
Chromosome Positionchr1:28478053-28483874 | Reverse length=790
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.06637293827
Replicate 23.1692528930261
Replicate 33.0254181730767
Condition 2: 8 Hour
Replicate 13.6959796146785
Replicate 22.9533240167604
Replicate 33.7673154117784
Condition 3: 24 Hour
Replicate 11.9492477834843
Replicate 22.7048902412972
Replicate 33.5102922611062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_105954.p1 GENE.R_Transcript_105954~~R_Transcript_105954.p1 ORF type:3prime_partial len:106 (+),score=16.39,tRNA-synt_1g|PF09334.7|1.2e-12 R_Transcript_105954:3-317(+)
ATGACAACTCTAGTCGATTTCTATTGTGAGGAGTGTAGCAAGTTCTTGGCTGACAGTCTGGTGGAAGGCCAATGCCCTCACTGTTGTCAACCTTGTAAGGGAGATCAGTGTGAGGACTGTGGGAGATTCATTTATGAAAGAGAACTCCTAAATCCTGTCTGTAAGCTTATTGAGGCTCTCTCACATGTTCCGGCGCTTGAGTTGGCCTTGCGTCTGTACTTGCAATGCGCTGAGGACTCCAGAGAACAGGTGACTGCATTATACCTGATAATAGGGACTCTTCAAAGAATTCATGTCGTTGGGGTTGAGAACAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_105954.p1 GENE.R_Transcript_105954~~R_Transcript_105954.p1 ORF type:3prime_partial len:106 (+),score=16.39,tRNA-synt_1g|PF09334.7|1.2e-12 R_Transcript_105954:3-317(+)
MTTLVDFYCEECSKFLADSLVEGQCPHCCQPCKGDQCEDCGRFIYERELLNPVCKLIEALSHVPALELALRLYLQCAEDSREQVTALYLIIGTLQRIHVVGVENR

Click here to download the sequence:
Link to NCBI Protein BLAST