Transcript Information: R_Transcript_106041.p1


Annotated TAIR IDAT5G03720.1
Annotated Gene Nameheat shock transcription factor A3
Annotated Gene Symbol(s)AT-HSFA3, HSFA3
Annotation TypeOrtholog
Chromosome Positionchr5:971913-973683 | Reverse length=412
E-Value7E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3917672975149
Replicate 21.882426933875
Replicate 32.685617511273
Condition 2: 8 Hour
Replicate 13.2084926482597
Replicate 23.2384725425165
Replicate 34.2562397316769
Condition 3: 24 Hour
Replicate 10.94997823011189
Replicate 20.91263140236872
Replicate 33.7737421873961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106041.p1 GENE.R_Transcript_106041~~R_Transcript_106041.p1 ORF type:complete len:145 (+),score=20.89,HSF_DNA-bind|PF00447.13|3.8e-22 R_Transcript_106041:395-829(+)
ATGGATCCTGAATTCCCCAACTATTTCTCTTCTCCTCCTTCATCTCCCTCACAACCACTTGAAACCTCCCAAACTTCCTCACCCCCAATCGGGTCATCTCCCTTTGACGCGTCCATCTCATTCCCCGACCCGTTTTCATTTTCTCCCCTGTTTGGTGAAGGGGAAAATGTTGGGGTTCCAAGGCCCCTAGAGTGCTTACAAGGAACCCCAATTCCTCCATTCTTGTCGAAGACTTATGACTTGGTGGAGGATCCGACATTAGACCCGATCATCTCGTGGGGTCCACAAGGGGAGAGCTTTGTTGTGTGGGACCCTGTGGAGTTTGCTAGAATTGTTCTTCCTCGGAATTTCAAGCACAACAATTTCTCCAGCTTTGTTCGCCAGCTTAATACTTATGTGGGTATTTGCTTGTGTTGCCAAAAAAATAAAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106041.p1 GENE.R_Transcript_106041~~R_Transcript_106041.p1 ORF type:complete len:145 (+),score=20.89,HSF_DNA-bind|PF00447.13|3.8e-22 R_Transcript_106041:395-829(+)
MDPEFPNYFSSPPSSPSQPLETSQTSSPPIGSSPFDASISFPDPFSFSPLFGEGENVGVPRPLECLQGTPIPPFLSKTYDLVEDPTLDPIISWGPQGESFVVWDPVEFARIVLPRNFKHNNFSSFVRQLNTYVGICLCCQKNKI*

Click here to download the sequence:
Link to NCBI Protein BLAST