Transcript Information: R_Transcript_106077.p1


Annotated TAIR IDAT3G02300.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:461551-463929 | Forward length=471
E-Value7.6E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2849205683979
Replicate 23.9336134599877
Replicate 35.4619471640461
Condition 2: 8 Hour
Replicate 15.0044103541815
Replicate 25.9846642397334
Replicate 35.8738788625583
Condition 3: 24 Hour
Replicate 14.8038234101765
Replicate 23.9710198489117
Replicate 35.3787303488482


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106077.p1 GENE.R_Transcript_106077~~R_Transcript_106077.p1 ORF type:complete len:411 (+),score=98.30,RCC1|PF00415.14|4.2e+03,RCC1|PF00415.14|9.2e-10,RCC1|PF00415.14|63,RCC1|PF00415.14|49,RCC1|PF00415.14|3.9e-08,RCC1|PF00415.14|4.5e-13,RCC1|PF00415.14|1.9e-09,RCC1|PF00415.14|5e-05,RCC1_2|PF13540.2|0.0016,RCC1_2|PF13540.2|0.00016,RCC1_2|PF13540.2|5.5e-10,RCC1_2|PF13540.2|1.9e-08,RCC1_2|PF13540.2|2.7e-07,RCC1_2|PF13540.2|2.3 R_Transcript_106077:1370-2602(+)
ATGTCGTCATGTGTCAGTTTACTGGTGGATGATAGTTTCTATGTTTTTGTTCAGGGTTTAGGCCTTCAAAGTTGCATTAAAGAATGTTGTTTTTTCCCCCTTATGCTACAATCTTATAATAATAATACCTGGGTAATTTTGGCAGGAGCAAATGACTTCGGTCAGTTGGGTGATGGAACTGAGGAAGGCAGGAAATACCCAAAGAAGGTGGAGCTATTAAAGACTGAATTTGTGAAATCTGTATCTTGTGGAGCAAATTGTACTGTTGCCATTGCAGAACCTCGTGAGAATGATGGGACAATATCAACTGGCAGGCTTTGGGTTTGGGGCCAAAACCAGGTTATTCGTCAAGTTTCTTGTGGATCTGTCCATGTAATGGCCTTGTCAGAGGACTGCCTTCTCCAATCTTGGGGCTACAATGAATATGGCCAACTTGGCAGAGGTTTTACTTGTGAAGGGCTACAGGGACCCGGTGTTTTAAAAGCATATGCAAAACATCTTGATGAGGCCCCTGAGTTAGTTAAGGTCGCTCAAGTTTCATGTGGCGAGTACCATACTGCTGCTATATCAGATACCGGTGATGTCTACACTTGGGGTCTTGGAAGCATGGGCCAACTGGGACATTGCTCTATTCAATCTGAAGATAAGGAGTTGTTGCCTAGGCGAGTGGTCGCTCTTGATGGAATTTGTGTCACCAGTGTTGCTTGTGGAGGTGTACATACCTGTGCACTCACTGCAAAGGGAGCTCTCTATGCTTGGGGTGGAGGGCAAGTTGGTCAGCTTGGCCTTGGTCCACAAGCTAGTTCTGCATCTTTCATTTTCAAGGACTCTCAAGTGATGCTTCGGACTATCCCAGCTATGGTCATTCCAAGTGGTGTGCAGCTTGTTGCTTGTGGGCATTCTCACACCCTTATCTCTACCTCAGATGGGCGAATCCATGGATGGGGTTATAATAGCTATGGTCAGGCAGCGAATGAGAAGTCTACATATGCTTGGTACCCATCACCAGTTGATTGGTGTGTAGGAGAAGTGAGGAAACTTGCCGCTGGTGGTGGCCATTCAGCTGTGCTGACTGATGCATGTTCTTTGAAGGATTTATGTGAATTCAGGCTTGCTGAAAGTGTTACCCTGGACAATGCCTCCAAGATTGAGGATGTTGCATTCAGAACCAGCTCTGATGCTTTGGTACGCCTTTGTGAAAGATTGAGATGGTTGCATGATGGTGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106077.p1 GENE.R_Transcript_106077~~R_Transcript_106077.p1 ORF type:complete len:411 (+),score=98.30,RCC1|PF00415.14|4.2e+03,RCC1|PF00415.14|9.2e-10,RCC1|PF00415.14|63,RCC1|PF00415.14|49,RCC1|PF00415.14|3.9e-08,RCC1|PF00415.14|4.5e-13,RCC1|PF00415.14|1.9e-09,RCC1|PF00415.14|5e-05,RCC1_2|PF13540.2|0.0016,RCC1_2|PF13540.2|0.00016,RCC1_2|PF13540.2|5.5e-10,RCC1_2|PF13540.2|1.9e-08,RCC1_2|PF13540.2|2.7e-07,RCC1_2|PF13540.2|2.3 R_Transcript_106077:1370-2602(+)
MSSCVSLLVDDSFYVFVQGLGLQSCIKECCFFPLMLQSYNNNTWVILAGANDFGQLGDGTEEGRKYPKKVELLKTEFVKSVSCGANCTVAIAEPRENDGTISTGRLWVWGQNQVIRQVSCGSVHVMALSEDCLLQSWGYNEYGQLGRGFTCEGLQGPGVLKAYAKHLDEAPELVKVAQVSCGEYHTAAISDTGDVYTWGLGSMGQLGHCSIQSEDKELLPRRVVALDGICVTSVACGGVHTCALTAKGALYAWGGGQVGQLGLGPQASSASFIFKDSQVMLRTIPAMVIPSGVQLVACGHSHTLISTSDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKDLCEFRLAESVTLDNASKIEDVAFRTSSDALVRLCERLRWLHDGDE*

Click here to download the sequence:
Link to NCBI Protein BLAST