Transcript Information: R_Transcript_106078.p1


Annotated TAIR IDAT3G02300.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:461551-463929 | Forward length=471
E-Value7.1E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4009841269902
Replicate 22.9022963858382
Replicate 33.0179503096443
Condition 2: 8 Hour
Replicate 14.019278047496
Replicate 23.0909210320429
Replicate 33.8812299166702
Condition 3: 24 Hour
Replicate 15.20641416611
Replicate 22.9057684499465
Replicate 34.3491767412409


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106078.p1 GENE.R_Transcript_106078~~R_Transcript_106078.p1 ORF type:complete len:463 (+),score=108.65,RCC1|PF00415.14|9.8e-08,RCC1|PF00415.14|2.8e-15,RCC1|PF00415.14|92,RCC1|PF00415.14|15,RCC1|PF00415.14|4.6e-08,RCC1|PF00415.14|5.3e-13,RCC1|PF00415.14|2.3e-09,RCC1|PF00415.14|5.9e-05,RCC1_2|PF13540.2|2.6,RCC1_2|PF13540.2|0.00019,RCC1_2|PF13540.2|0.0029,RCC1_2|PF13540.2|0.00019,RCC1_2|PF13540.2|6.3e-10,RCC1_2|PF13540.2|2.2e-08,RCC1_2|PF13540.2|3.1e-07,RCC1_2|PF13540.2|2.6 R_Transcript_106078:310-1698(+)
ATGGAGATTGGTGAAATACTTGAGGAACCGAGGCCTGTGGCTTTACCAACAAAGAGCGCCATTTATGTGTGGGGTTACAATCAGCGAGGGCAGACCGGGAGGAGAGAGAAGGAGCAGAGGTTGAGGATTCCAAGACAGCTGCCTCCGGAGTTGTTTGGGTGCCCAGCCGGGATCAGTACCCGGTGGTTGGATGTCGCTTGTGGCCGCGAGCACACAGCCACTGTGGCCTCTGATGGCTCACTCTTCACTTGGGGAGCAAATGACTTCGGTCAGTTGGGTGATGGAACTGAGGAAGGCAGGAAATACCCAAAGAAGGTGGAGCTATTAAAGACTGAATTTGTGAAATCTGTATCTTGTGGAGCAAATTGTACTGTTGCCATTGCAGAACCTCGTGAGAATGATGGGACAATATCAACTGGCAGGCTTTGGGTTTGGGGCCAAAACCAGGGATCGGATTATCCGCGTCTGTTTTGGGGAGCTTTTTCCCCAAACACGGTTATTCGTCAAGTTTCTTGTGGATCTGTCCATGTAATGGCCTTGTCAGAGGACTGCCTTCTCCAATCTTGGGGCTACAATGAATATGGCCAACTTGGCAGAGGTTTTACTTGTGAAGGGCTACAGGGACCCGGTGTTTTAAAAGCATATGCAAAACATCTTGATGAGGCCCCTGAGTTAGTTAAGGTCGCTCAAGTTTCATGTGGCGAGTACCATACTGCTGCTATATCAGATACCGGTGATGTCTACACTTGGGGTCTTGGAAGCATGGGCCAACTGGGACATTGCTCTATTCAATCTGAAGATAAGGAGTTGTTGCCTAGGCGAGTGGTCGCTCTTGATGGAATTTGTGTCACCAGTGTTGCTTGTGGAGGTGTACATACCTGTGCACTCACTGCAAAGGGAGCTCTCTATGCTTGGGGTGGAGGGCAAGTTGGTCAGCTTGGCCTTGGTCCACAAGCTAGTTCTGCATCTTTCATTTTCAAGGACTCTCAAGTGATGCTTCGGACTATCCCAGCTATGGTCATTCCAAGTGGTGTGCAGCTTGTTGCTTGTGGGCATTCTCACACCCTTATCTCTACCTCAGATGGGCGAATCCATGGATGGGGTTATAATAGCTATGGTCAGGCAGCGAATGAGAAGTCTACATATGCTTGGTACCCATCACCAGTTGATTGGTGTGTAGGAGAAGTGAGGAAACTTGCCGCTGGTGGTGGCCATTCAGCTGTGCTGACTGATGCATGTTCTTTGAAGGATTTATGTGAATTCAGGCTTGCTGAAAGTGTTACCCTGGACAATGCCTCCAAGATTGAGGATGTTGCATTCAGAACCAGCTCTGATGCTTTGGTACGCCTTTGTGAAAGATTGAGAGAGTTGCATGATGGTGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106078.p1 GENE.R_Transcript_106078~~R_Transcript_106078.p1 ORF type:complete len:463 (+),score=108.65,RCC1|PF00415.14|9.8e-08,RCC1|PF00415.14|2.8e-15,RCC1|PF00415.14|92,RCC1|PF00415.14|15,RCC1|PF00415.14|4.6e-08,RCC1|PF00415.14|5.3e-13,RCC1|PF00415.14|2.3e-09,RCC1|PF00415.14|5.9e-05,RCC1_2|PF13540.2|2.6,RCC1_2|PF13540.2|0.00019,RCC1_2|PF13540.2|0.0029,RCC1_2|PF13540.2|0.00019,RCC1_2|PF13540.2|6.3e-10,RCC1_2|PF13540.2|2.2e-08,RCC1_2|PF13540.2|3.1e-07,RCC1_2|PF13540.2|2.6 R_Transcript_106078:310-1698(+)
MEIGEILEEPRPVALPTKSAIYVWGYNQRGQTGRREKEQRLRIPRQLPPELFGCPAGISTRWLDVACGREHTATVASDGSLFTWGANDFGQLGDGTEEGRKYPKKVELLKTEFVKSVSCGANCTVAIAEPRENDGTISTGRLWVWGQNQGSDYPRLFWGAFSPNTVIRQVSCGSVHVMALSEDCLLQSWGYNEYGQLGRGFTCEGLQGPGVLKAYAKHLDEAPELVKVAQVSCGEYHTAAISDTGDVYTWGLGSMGQLGHCSIQSEDKELLPRRVVALDGICVTSVACGGVHTCALTAKGALYAWGGGQVGQLGLGPQASSASFIFKDSQVMLRTIPAMVIPSGVQLVACGHSHTLISTSDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKDLCEFRLAESVTLDNASKIEDVAFRTSSDALVRLCERLRELHDGDE*

Click here to download the sequence:
Link to NCBI Protein BLAST