Transcript Information: R_Transcript_106163.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value5E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58038031652524
Replicate 20.36718490394162
Replicate 30.87402496392314
Condition 2: 8 Hour
Replicate 10.27249770211561
Replicate 20.63989804950928
Replicate 30.77916293601025
Condition 3: 24 Hour
Replicate 10.36498898613202
Replicate 20.21038402757307
Replicate 30.80034532241437


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106163.p1 GENE.R_Transcript_106163~~R_Transcript_106163.p1 ORF type:complete len:629 (+),score=60.54,RVT_3|PF13456.2|4.1e-19,zf-RVT|PF13966.2|5.1e+03,zf-RVT|PF13966.2|4.3e-15 R_Transcript_106163:1071-2957(+)
ATGGCAACTGACAACCTTGGAAATTACCTTGGTGTACCAGTGATTCACAATCGAGTGGGGCGAAACACCTTCAAGCATATCATTGATAAGGTTAATAGTAGATTAGCGGGTTGGAAAGCACAACACCTCAGCTTCGCAGGACGCCTTACTTTGGTTAAATCAGTTACGTCTACTATTCCTAACCATGTGATGCAAACCACGCATCTCCCTATTGCTGTGTGTAAGGAGCTGGACAAAAGAAACAGAGATTTCCTTTGGGGAGACACCGAGAACAAGAAGAGGCCTCATCATGTGAATTGGGATCAGATATGTCGCCCTAAATCTGTTGGAGGGTTGGGCCTACGTTCTGCACGCCAAGCCAATGTTGCATTACTATCAAAGTTAGGGTGGAGGATGCTCAAGGAGCCAGAGGCCTTATGGTCTCGTGTCCTGAAAGCTAAATATGGTGGGGACCGCCACGGTGCTCATCTATTCCGGTCAGCATCAGGAGCCTCGCATCTTTGGCGAGGGGTTACCAAATGTGCTCCATTACTCCATCAAGGGCTGGGTTGGCAAGTTTCAAATGGCGCAAAAGCGCGTTTTTGGCTTGACAACTGGCTGGTTCCGGAGCCCCTTATTTCCCAAGCTACATGTGACATCGATGATGAAGAGCGAAATCGCTCAGTTGCGGATTATTGGGATAACAACTTAGGTTGGAAATGGGAGGACGTGGGGACTAAGCTACCTGCCATCACTCTTCTCAAACTTGCAGCTATCTGCCTTCGTGAAAATACTACCATTCCAGATTCCATTATTTGGATGCGCAGTAATTCTGGGTGCTTCTCAACCTCCTCAGCCTATGATATTATTCGACCTAAAGACAAGGATATAGTGGATCGCATTTGGGGAGCCATATGGTCAGTGTCCTGTCCAGAGAAATTTCACACCTTCGCTTGGCAAATGGCGCATGATCGAATACTTTCCAACTTTACAAGATGGAAGCGAGGTATGACCGAGACGCCTATTTGTGACTATTGTAATCTCTTTGATGAAGATACCCTGCATGCTCTTCGCGACTGCCATGCAGCTTCAACCATATGGAACAAGCTGGTTCGAGGGGATGCTAAGGTGGATTTTTATACTTGGAATTTACAAGACTGGTTATACAAGAATTGCACTTCCCATCTCGGGACTGACTCTTCTTGGGATTGGTCTCGCATGTTTTTAACCACAGTGTGGTTTATTTGGCGATGGCGGTGCTATAGGGCCTTTGGAGGACATGCTCGAATACCCTTTGGACCGGTGCAGTACATACGAGAACAATATCGAGCTATCTCCAATGCACTGGATGATGAGGAACAAGTAAAAGCATGCTCTAAGGTTTTAGCCTTTATTGGATGGCAGTACCCTCCCCTGGAGTGGGTTAAGTTGAATACAGATGGGGCAGCAAAAGGAAACCCGGGACGTGCTGGTGCTGGTGGTGTCCTTCGCAACAGCTTGGGTCAATGGGTGCAGGGCTTTGCTCACCACTTGGGCATTTGTACATCGGTGGTCTCGGAAATATGGGGAGTGCTCACTGGATTGCGGATGGCATGGGCGCTGGGCTTCAAGAAAGTGATTTTAGAGGTGGACTCTATGGTGGTAAGGAACCTTATAACTACTGAAGTGGACTGGAGCAGTCCCCATGCTAATCTAATTGCATTATGTAGACAAGAGCTTGGTAGGAATTGGTTAATCAGGGTCGAGCACGTGTATCGCGAGGCTAATGGTGTTGCGGATGCTTTGGCAAACAAAGCCCTTTCTTTGGAGTTGGGTGTTCATCATTTCGACAGTCCTCCCCTAGGCGTAGCCTCTATTGTTTTGCAGGATATTAGCGGGGTGTCCTTCCCTCGTTTAGTTAGTATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106163.p1 GENE.R_Transcript_106163~~R_Transcript_106163.p1 ORF type:complete len:629 (+),score=60.54,RVT_3|PF13456.2|4.1e-19,zf-RVT|PF13966.2|5.1e+03,zf-RVT|PF13966.2|4.3e-15 R_Transcript_106163:1071-2957(+)
MATDNLGNYLGVPVIHNRVGRNTFKHIIDKVNSRLAGWKAQHLSFAGRLTLVKSVTSTIPNHVMQTTHLPIAVCKELDKRNRDFLWGDTENKKRPHHVNWDQICRPKSVGGLGLRSARQANVALLSKLGWRMLKEPEALWSRVLKAKYGGDRHGAHLFRSASGASHLWRGVTKCAPLLHQGLGWQVSNGAKARFWLDNWLVPEPLISQATCDIDDEERNRSVADYWDNNLGWKWEDVGTKLPAITLLKLAAICLRENTTIPDSIIWMRSNSGCFSTSSAYDIIRPKDKDIVDRIWGAIWSVSCPEKFHTFAWQMAHDRILSNFTRWKRGMTETPICDYCNLFDEDTLHALRDCHAASTIWNKLVRGDAKVDFYTWNLQDWLYKNCTSHLGTDSSWDWSRMFLTTVWFIWRWRCYRAFGGHARIPFGPVQYIREQYRAISNALDDEEQVKACSKVLAFIGWQYPPLEWVKLNTDGAAKGNPGRAGAGGVLRNSLGQWVQGFAHHLGICTSVVSEIWGVLTGLRMAWALGFKKVILEVDSMVVRNLITTEVDWSSPHANLIALCRQELGRNWLIRVEHVYREANGVADALANKALSLELGVHHFDSPPLGVASIVLQDISGVSFPRLVSI*

Click here to download the sequence:
Link to NCBI Protein BLAST