Transcript Information: R_Transcript_106163.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5112874217008
Replicate 20.17643949929662
Replicate 30.12832906216332
Condition 2: 8 Hour
Replicate 10.27435142798034
Replicate 20.12527104672933
Replicate 30.050844847676154
Condition 3: 24 Hour
Replicate 10.06430758327088
Replicate 20
Replicate 30.061310097162177


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106163.p2 GENE.R_Transcript_106163~~R_Transcript_106163.p2 ORF type:5prime_partial len:357 (+),score=26.70,RVT_1|PF00078.23|1e-42 R_Transcript_106163:1-1071(+)
CAATTGCAAAACATGGCCCTTGATTTTTATAAGAAATTGTACCATCGAGAAGATGACCCACATATCAATGTCCTTCCTACTCGGTGCTTCCCAGTTCTTACTCAGGACATTCTTGACCCTGTGTTTGAACCATACACCCGAGAAGAGATTAAAAAGGCCCTGTTTGATATGGGTCCGTACAAAGCACCCGGCCCGGACGGATTCCATGCGGTGTTTTTCCAGAAAATGTGGGATATCGTAGGCAACGCAATTTGTGAGTTTGCCCTCGAGTTTTTCCGGCTGAACCATCTTCCTGAAGGTATGAACGATACACTTCTGGTTTTGATCCCGAAAGTGCCTGAACCGGAGCGCCTCACTCAACTTCGCCCTATAGCTTTGTGTAATGTAGTTTACAAGATTCTTACCAAAGTTCTGGCAAACAGGATCAAGCTTATTCTGCCTCAGTTGGTCTCACCGACACAGGCAAGCTTCGTTCCTGGAAGGCAAATCTCTGACAACATTGTGATTACCCAAGAAGTTATACATGCTATGAAAAGAAGATCTTCGGGCACGGGTTGGATGGCAATCAAGATTGATTTGGAAAAGGCTTATGACCGCCTTAAGTGGGAGTTCATCTATGATACTATGATGGACCTACCATTTCCTGTTAGCATGGTCGGGGCTATAATGGCGTGCGTTACTGGTGCTCGTATGAGGCTCTTATGGAATGGAGAACAGACAGAGATTTTTGAAGCCTCACGAGGTATACGGCAGGGTGACCCAATCTCGCCTTATATTTTTGTGCTATGTATGGAACAATTGGCTCACCGAATCCAAATTGCGGTGGATGACAAAGCATGGAAACCAATTCGTATCACGAAAAAAGCTCCTCCCTTGAGTCATCTCTTTTTCGCGGATGATCTCATATTATTCGCAGAAGCCACAATGGATCAAGTGGAGGTAATTTTAACTTGTCTGGAGGATTTTTGTATCTCATCTGGGCAGAAGGTGAACAAACAGAAATCGGCTGTCTATTTCTCGAAGGCGGTTGACTTATCCATGCAAAATCAAATTAGTATGGCCTTGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106163.p2 GENE.R_Transcript_106163~~R_Transcript_106163.p2 ORF type:5prime_partial len:357 (+),score=26.70,RVT_1|PF00078.23|1e-42 R_Transcript_106163:1-1071(+)
QLQNMALDFYKKLYHREDDPHINVLPTRCFPVLTQDILDPVFEPYTREEIKKALFDMGPYKAPGPDGFHAVFFQKMWDIVGNAICEFALEFFRLNHLPEGMNDTLLVLIPKVPEPERLTQLRPIALCNVVYKILTKVLANRIKLILPQLVSPTQASFVPGRQISDNIVITQEVIHAMKRRSSGTGWMAIKIDLEKAYDRLKWEFIYDTMMDLPFPVSMVGAIMACVTGARMRLLWNGEQTEIFEASRGIRQGDPISPYIFVLCMEQLAHRIQIAVDDKAWKPIRITKKAPPLSHLFFADDLILFAEATMDQVEVILTCLEDFCISSGQKVNKQKSAVYFSKAVDLSMQNQISMALG*

Click here to download the sequence:
Link to NCBI Protein BLAST