Transcript Information: R_Transcript_106398.p1


Annotated TAIR IDAT5G47920.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19403458-19404021 | Reverse length=187
E-Value1.1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1482710385104
Replicate 24.6299534251324
Replicate 35.5211111129188
Condition 2: 8 Hour
Replicate 15.776152756786
Replicate 210.89376294827
Replicate 313.683521852292
Condition 3: 24 Hour
Replicate 18.3589964777794
Replicate 27.3517529635258
Replicate 37.6326354805591


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106398.p1 GENE.R_Transcript_106398~~R_Transcript_106398.p1 ORF type:complete len:195 (+),score=36.98,DUF761|PF05553.7|4.6e-14 R_Transcript_106398:193-777(+)
ATGAAGAACAAAGCTTCTCTTCTAATGAAGAACACGATCTCGGTAATAAGCAACATTGTTAAAGCCAAATTAATGGGGGTCAAGAGCAAGGCAAACGCCATGAGAGTCCGCCTTCTAGTGTTCTCGTTGTTGAAGAGTAGAAAGCTTTCCCTCGGCTCACTCTCTAACAAGATCCAAGCCTTGTTAGACAAGAAGAGCTACGATGAGGAGCATGAACAAGATGTTGATAAGAACAACCAAATCAACAATGTCGAGGAAGACGAGAAAGAAGAAGAAGATCGAAGCAAAGCAATTGTCCTCTATGATGCTAATTATTGTAGTTACTATGATCAAGAAGATGATGATAAGTATCCGGATCTTACGCACTCGTTGTTCGACGAAGAGGATGATGGCTTCGATTATGACCAAGGACGGTCCGTCATCGAATTGGTGAAGAACTCAAAAGAGAATAACGGAGATTTTAGCTTGGAAGCTGAGATTGATAATGTTGCAGATCTGTTCATTAGGAGGTTCAAGAAGCATATGCGCCTTGAGAAGTTGGAGTCTTTTAAGAGATATCAGGCCATGCTAGGGAGAAGTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106398.p1 GENE.R_Transcript_106398~~R_Transcript_106398.p1 ORF type:complete len:195 (+),score=36.98,DUF761|PF05553.7|4.6e-14 R_Transcript_106398:193-777(+)
MKNKASLLMKNTISVISNIVKAKLMGVKSKANAMRVRLLVFSLLKSRKLSLGSLSNKIQALLDKKSYDEEHEQDVDKNNQINNVEEDEKEEEDRSKAIVLYDANYCSYYDQEDDDKYPDLTHSLFDEEDDGFDYDQGRSVIELVKNSKENNGDFSLEAEIDNVADLFIRRFKKHMRLEKLESFKRYQAMLGRSA*

Click here to download the sequence:
Link to NCBI Protein BLAST